Sequence of DPV Cherry small circular viroid-like RNA

Cherry small circular viroid-like RNA 1 isolate cscRNA1.103, complete genome.

ACC No: DQ357624

Dated: 2006-07-21 | Length: 394 | CRC: 850223415

                
ID   DQ357624; SV 1; circular; genomic RNA; STD; VRL; 394 BP.
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AC   DQ357624;
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DT   21-JUL-2006 (Rel. 88, Created)
DT   21-JUL-2006 (Rel. 88, Last updated, Version 1)
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DE   Cherry small circular viroid-like RNA 1 isolate cscRNA1.103, complete
DE   genome.
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KW   .
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OS   Cherry small circular viroid-like RNA 1
OC   Viroids; unclassified viroids.
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RN   [1]
RP   1-394
RX   PUBMED; 16514498.
RA   Di Serio F., Daros J.A., Ragozzino A., Flores R.;
RT   "Close structural relationship between two hammerhead viroid-like RNAs
RT   associated with cherry chlorotic rusty spot disease";
RL   Arch. Virol. 151(8):1539-1549(2006).
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RN   [2]
RP   1-394
RA   Flores R.;
RT   ;
RL   Submitted (10-JAN-2006) to the EMBL/GenBank/DDBJ databases.
RL   Instituto de Biologia Molecular y Celular de Plantas (UPV-CSIC),
RL   Universidad Politecnica de Valencia, Avenida de los Naranjos s/n, Valencia,
RL   Valencia 46022, Spain
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FH   Key             Location/Qualifiers
FH
FT   source          1. .394
FT                   /organism="Cherry small circular viroid-like RNA 1"
FT                   /specific_host="cherry tree cultivar Imperiale displaying
FT                   symptoms of cherry chlorotic rusty spot disease"
FT                   /isolate="cscRNA1.103"
FT                   /mol_type="genomic RNA"
FT                   /country="Italy"
FT                   /isolation_source="symptomatic leaves"
FT                   /db_xref="taxon:368620"
FT   gene            complement(230. .280)
FT                   /gene="RZ-"
FT                   /note="hammerhead ribozyme minus"
FT   misc_feature    complement(274. .275)
FT                   /gene="RZ-"
FT                   /product="RZ-self-cleavage site"
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SQ   Sequence 394 BP; 107 A; 77 C; 100 G; 110 T; 0 other;

dq357624 Length: 394  21-JUL-2006  Type: N  Check: 3772  ..

       1  gtgggatgtg tgtctcacct gaagaggaca aaagtccgaa acggtattct
      51  tgtttctagc tgaagtttta agtcggaaga agtttcttcc agactgagcc
     101  aatcacggtc aacaaaacct tgcttttcct gttttccatt gtggacaggg
     151  gttatccttt gaggtaaccg caggcgcagg tcctgaaatc gtgaggtggc
     201  atgaacatta agcgaagaaa aggagaataa ctatttcgtt cttttgaact
     251  cgtcagtagg gacacacatc cccatatagc ggtatcttca tacttcaggg
     301  cctgcgcctg agggttactt aacaagaagt aacattccgt cttaaggaag
     351  acgggaagca aaggttttgt tggtatgaga tgccttatgc tgta