Sequence of DPV Cherry small circular viroid-like RNA
Cherry small circular viroid-like RNA 1 isolate cscRNA1.100, complete genome.
ACC No: DQ357627
Dated: 2006-07-21 | Length: 402 | CRC: 586790597
ID DQ357627; SV 1; circular; genomic RNA; STD; VRL; 402 BP. XX AC DQ357627; XX DT 21-JUL-2006 (Rel. 88, Created) DT 21-JUL-2006 (Rel. 88, Last updated, Version 1) XX DE Cherry small circular viroid-like RNA 1 isolate cscRNA1.100, complete DE genome. XX KW . XX OS Cherry small circular viroid-like RNA 1 OC Viroids; unclassified viroids. XX RN [1] RP 1-402 RX PUBMED; 16514498. RA Di Serio F., Daros J.A., Ragozzino A., Flores R.; RT "Close structural relationship between two hammerhead viroid-like RNAs RT associated with cherry chlorotic rusty spot disease"; RL Arch. Virol. 151(8):1539-1549(2006). XX RN [2] RP 1-402 RA Flores R.; RT ; RL Submitted (10-JAN-2006) to the EMBL/GenBank/DDBJ databases. RL Instituto de Biologia Molecular y Celular de Plantas (UPV-CSIC), RL Universidad Politecnica de Valencia, Avenida de los Naranjos s/n, Valencia, RL Valencia 46022, Spain XX FH Key Location/Qualifiers FH FT source 1. .402 FT /organism="Cherry small circular viroid-like RNA 1" FT /specific_host="cherry tree cultivar Imperiale displaying FT symptoms of cherry chlorotic rusty spot disease" FT /isolate="cscRNA1.100" FT /mol_type="genomic RNA" FT /country="Italy" FT /isolation_source="symptomatic leaves" FT /db_xref="taxon:368620" FT gene join(397. .402,1. .45) FT /gene="RZ+" FT /note="hammerhead ribozyme plus" FT misc_feature join(402,1) FT /gene="RZ+" FT /product="RZ+ self-cleavage site" FT gene complement(242. .292) FT /gene="RZ-" FT /note="hammerhead ribozyme minus" FT misc_feature complement(286. .287) FT /gene="RZ-" FT /product="RZ-self-cleavage site" XX SQ Sequence 402 BP; 110 A; 86 C; 99 G; 107 T; 0 other; dq357627 Length: 402 21-JUL-2006 Type: N Check: 2507 .. 1 gtgggatgtg cgtctcacct gaagaggaca aaagtccgaa acagtatgtt 51 cagtctttat ctctcgctga aagttttaag tcggaagaag tttcttcctg 101 actgagccaa acacggtaaa caaaaccttt gcttttcccg cattccatta 151 aggacggggg ttatcctttg aggtaacgac aggtgcaggt cctgaaatcg 201 tgtggaggca tgaactttag gcgatgaaaa ggagaataac agctatttcg 251 ttcttttgaa ctcatcagta gagacgcgca tctccatata gctggctcgg 301 gatatatttt caggaccgca cctggtagtc acccatacag gtaactcttc 351 gtctaaagga agacggaaag caggttttgt cggtataccc gagctcactg 401 ta