Sequence of DPV Citrus tristeza virus
Citrus tristeza virus clone AR128 coat protein gene, complete cds.
ACC No: DQ363385
Dated: 2012-07-27 | Length: 672 | CRC: 1035459995
ID DQ363385; SV 1; linear; genomic RNA; STD; VRL; 672 BP. XX AC DQ363385; XX DT 16-FEB-2006 (Rel. 86, Created) DT 27-JUL-2012 (Rel. 113, Last updated, Version 2) XX DE Citrus tristeza virus clone AR128 coat protein gene, complete cds. XX KW . XX OS Citrus tristeza virus OC Viruses; ssRNA positive-strand viruses, no DNA stage; Closteroviridae; OC Closterovirus. XX RN [1] RP 1-672 RA Brlansky R.H., Roy A., Damsteegt V.D.; RT "Stem-Pitting Citrus tristeza virus Predominantly Transmitted by the Brown RT Citrus Aphid from Mixed Infections Containing Non-Stem-Pitting and RT Stem-Pitting Isolates"; RL Plant Dis. 95(8):913-920(2011). XX RN [2] RP 1-672 RA Roy A., Brlansky R.H., Damsteegt V.; RT "Aphid Transmission of Stem Pitting Citrus tristeza virus from Mixed Virus RT Infections"; RL Unpublished. XX RN [3] RP 1-672 RA Roy A., Brlansky R.H., Damsteegt V.; RT ; RL Submitted (13-JAN-2006) to the INSDC. RL Plant Pathology, University of Florida, 700 Experiment Station Road, Crec, RL Lake Alfred, FL 33850, USA XX FH Key Location/Qualifiers FH FT source 1. .672 FT /organism="Citrus tristeza virus" FT /isolate="B408" FT /mol_type="genomic RNA" FT /country="USA" FT /clone="AR128" FT /note="genotype: SY568" FT /db_xref="taxon:12162" FT CDS 1. .672 FT /codon_start=1 FT /product="coat protein" FT /db_xref="GOA:Q2ESZ4" FT /db_xref="InterPro:IPR002679" FT /db_xref="UniProtKB/TrEMBL:Q2ESZ4" FT /protein_id="ABD18612.1" FT /translation="MDDETKKLKNKNKETKEGDDVVAAESSLGSLNLHIDPTLIAMNDV FT RQLGTQQNAALNRDLFLTLKGKYPNLSDKDKDFHLAMMLYRLAVKSSSLQSDDDTTGIT FT YTREGVEVDLSDKLWTDVVFNSKGIGNRTNALRVWGRSNDALYLAFCRQNRNLSYGGRP FT LDAGIPAGYHYLCADFLTGAGLTDLECAVYIQAKEQLLKKRGADEVVVTNVRQLGKFNT FT R" XX SQ Sequence 672 BP; 191 A; 125 C; 175 G; 181 T; 0 other; dq363385 Length: 672 27-JUL-2012 Type: N Check: 3288 .. 1 atggacgacg aaacaaagaa attgaagaac aaaaacaagg aaacgaaaga 51 aggcgacgat gttgttgctg cggagtcttc tctcggttcc ttaaacttac 101 acatcgatcc gactctgata gcgatgaacg atgtgcgtca gttaggtacc 151 caacagaacg ccgctttgaa cagagatttg ttccttactt tgaaagggaa 201 gtatcctaat ttgtctgata aagataagga ctttcactta gctatgatgt 251 tgtatcgttt agcggttaag agttcatcat tgcaaagtga cgacgacacc 301 acgggcataa cgtacactcg ggagggcgtc gaagtggatt tgtctgacaa 351 actttggact gacgtcgtgt ttaattctaa gggtattggt aaccgtacta 401 acgcccttcg agtctggggt agaagtaacg atgcccttta tttagcgttt 451 tgtagacaga atcgcaattt gagttatggt ggacgtccgc tagatgcagg 501 gattccggcc gggtatcatt acctgtgtgc agatttcttg accggagctg 551 gcttgactga tttagaatgt gctgtgtaca tacaagctaa agaacaattg 601 ttgaagaagc gaggggctga tgaagtcgta gttaccaatg tcaggcagct 651 tgggaaattc aacacacgtt ga