Sequence of DPV Citrus tristeza virus
Citrus tristeza virus clone AR145 coat protein gene, complete cds.
ACC No: DQ363391
Dated: 2012-07-27 | Length: 672 | CRC: -730461713
ID DQ363391; SV 1; linear; genomic RNA; STD; VRL; 672 BP. XX AC DQ363391; XX DT 16-FEB-2006 (Rel. 86, Created) DT 27-JUL-2012 (Rel. 113, Last updated, Version 2) XX DE Citrus tristeza virus clone AR145 coat protein gene, complete cds. XX KW . XX OS Citrus tristeza virus OC Viruses; ssRNA positive-strand viruses, no DNA stage; Closteroviridae; OC Closterovirus. XX RN [1] RP 1-672 RA Brlansky R.H., Roy A., Damsteegt V.D.; RT "Stem-Pitting Citrus tristeza virus Predominantly Transmitted by the Brown RT Citrus Aphid from Mixed Infections Containing Non-Stem-Pitting and RT Stem-Pitting Isolates"; RL Plant Dis. 95(8):913-920(2011). XX RN [2] RP 1-672 RA Roy A., Brlansky R.H., Damsteegt V.; RT "Aphid Transmission of Stem Pitting Citrus tristeza virus from Mixed Virus RT Infections"; RL Unpublished. XX RN [3] RP 1-672 RA Roy A., Brlansky R.H., Damsteegt V.; RT ; RL Submitted (13-JAN-2006) to the INSDC. RL Plant Pathology, University of Florida, 700 Experiment Station Road, Crec, RL Lake Alfred, FL 33850, USA XX FH Key Location/Qualifiers FH FT source 1. .672 FT /organism="Citrus tristeza virus" FT /isolate="FS627" FT /mol_type="genomic RNA" FT /country="USA" FT /clone="AR145" FT /note="genotype: T36" FT /db_xref="taxon:12162" FT CDS 1. .672 FT /codon_start=1 FT /product="coat protein" FT /db_xref="GOA:Q2ESY8" FT /db_xref="InterPro:IPR002679" FT /db_xref="UniProtKB/TrEMBL:Q2ESY8" FT /protein_id="ABD18618.1" FT /translation="MDDETKKLKNKNKETKEGDDVVAAESSFSSVNLHIDPTLITMNDV FT RQLSTQQNAALNRDLFLTLKGKHPNLPDKDKDFHIVMMLYRLAVKSSSLQSDDDATGIT FT YTREGVEVDLSDKLWTDVVFNSKGIGNRTNALRVWGRTNDALYLAFCRQNRNLSYGGRP FT LDAGIPAGYHYLCADFLTGAGLTDLECAVYIQAKEQLLKKRGADDIVVTNVRQLGKFNT FT R" XX SQ Sequence 672 BP; 197 A; 125 C; 167 G; 183 T; 0 other; dq363391 Length: 672 27-JUL-2012 Type: N Check: 1934 .. 1 atggacgacg aaacaaagaa attgaagaac aaaaacaagg aaacaaaaga 51 aggcgacgat gttgttgctg ccgagtcttc tttcagttcc gtaaacttac 101 acatcgatcc gactttgata acgatgaacg atgtgcgtca gttgagtacc 151 caacagaacg ctgctttgaa cagagactta ttccttactt tgaaagggaa 201 gcatcctaac ttacctgata aagataagga ctttcacata gttatgatgt 251 tgtatcgttt agcagttaag agttcatcat tacaaagcga tgacgacgcc 301 acgggtataa cgtacactcg ggagggtgtt gaagtggatt tgtctgacaa 351 actttggact gacgtcgtgt ttaactctaa gggtattggt aatcgtacca 401 acgcccttcg agtttggggt agaaccaacg atgcccttta cttagctttt 451 tgcagacaga atcgcaattt gagttatggc gggcgtccgc tagacgcagg 501 gattccggcc gggtatcatt acttgtgtgc ggatttcttg actggagctg 551 gtttgactga tttagaatgt gctgtgtaca tacaagctaa agaacaatta 601 ttgaagaagc gaggggctga tgatatcgta gttactaatg tcaggcagct 651 tgggaaattc aacacacgtt ga