Sequence of DPV Tomato golden mottle virus
Tomato golden mottle virus segment B, complete sequence.
ACC No: DQ406674
Dated: 2006-03-25 | Length: 2558 | CRC: -273924419
ID DQ406674 standard; circular genomic DNA; VRL; 2558 BP. XX AC DQ406674; XX SV DQ406674.1 XX DT 25-MAR-2006 (Rel. 87, Created) DT 25-MAR-2006 (Rel. 87, Last updated, Version 1) XX DE Tomato golden mottle virus segment B, complete sequence. XX KW . XX OS Tomato golden mottle virus OC Viruses; ssDNA viruses; Geminiviridae; Begomovirus. XX RN [1] RP 1-2558 RA Mauricio-Castillo J.A., Arguello-Astorga G.R., Alpuche-Solis A.G.; RT "First report of Tomato golden mottle virus in Mexico"; RL Unpublished. XX RN [2] RP 1-2558 RA Mauricio-Castillo J.A., Arguello-Astorga G.R., Alpuche-Solis A.G.; RT ; RL Submitted (18-FEB-2006) to the EMBL/GenBank/DDBJ databases. RL Molecular Biology, Instituto Potosino de Investigacion Cientifica y RL Tecnologica, Camino a la Presa San Jose 2055, San Luis Potosi, SLP 78231, RL Mexico XX FH Key Location/Qualifiers FH FT source 1. .2558 FT /organism="Tomato golden mottle virus" FT /segment="B" FT /specific_host="tomato" FT /isolate="SLP" FT /mol_type="genomic DNA" FT /country="Mexico:San Luis Potosi" FT /collection_date="2005" FT /db_xref="taxon:223342" FT gene 499. .1269 FT /gene="BV1" FT CDS 499. .1269 FT /codon_start=1 FT /gene="BV1" FT /product="nuclear shuttle protein" FT /note="nuclear transporter; NSP; BR1" FT /protein_id="ABD84429.1" FT /translation="MYAIRHRRGSSFTQRHPYARYNAVKRSSIVKRVNGKRHHSFVWKA FT HDEPKVEAQRIREHQYGPDFVLAHNSAISTFISYPSLGKTQPNRSRSYIKLKRLRFKGT FT VKIERVQPDMNMDGSPPKVEGVFSLVIVVDRKPHLGATGCLHTFDELFGARIHSHGNLS FT ITPSLKDRFYIRHVFKRVLSVEKDTTMVDLEGSTMLSNRRFNCWSTFKDIDHDSCNGVY FT GNISKNALLVYYCWMSDTISKASTFVSFDLDYVG" FT gene complement(1336. .2217) FT /gene="BC1" FT CDS complement(1336. .2217) FT /codon_start=1 FT /gene="BC1" FT /product="movement protein" FT /note="cell-to-cell movement protein; MP; BL1" FT /protein_id="ABD84430.1" FT /translation="MDSQLVNPPNAFNYIESHRDEYQLSHDLTEIIMQFPSTASQLTAR FT LSRSCMKIDHCVIEYRQQVPINATGSVIVEIHDKRMTDNESLQSSWTFPIRCNIDLHYF FT SASFFSLKDPIPWKLYYRVCDTNVHQRTHFAKFKGKLKLSTAKHSVDIPFRAPTVKILS FT KQFTDKDVDFSHVDYGKWERKPIRCASMSRLGLRGPIEIRPGESWASRSTLGNGLSDAD FT SEEQNEIHPYRHLNRLGTTILDTGESASVVGAQKADSNITMTMGQLNELVRTTVHECIN FT SNCKASQPKSLK" XX SQ Sequence 2558 BP; 685 A; 491 C; 549 G; 833 T; 0 other; dq406674 Length: 2558 25-MAR-2006 Type: N Check: 7370 .. 1 accggatggc cgcgcgattt tttacccgac ccggccctgt aaaaaatgac 51 cccgccctct ttttctcttt ttatcgtgac agctgtttcg cacttaatag 101 cccactttcg tggtaccttc attgaaatac gtggcacttt gtatgatgac 151 cctgaaattt agtggcacgt ctttctagat gttgaacttt aatttaaaat 201 ttgaataaat gacccactgt gtgtgggcgc tgagatttag tggcacgtct 251 ttctatgtgt taaattataa tgtagaaatt gactgggtac gtgtgtcgtt 301 tacaatcgtg tattgactaa cgaaagacgt ggatatttat aagccataac 351 gatgagtcta cttaagatat gtgtctagga aggtcgtcta tataatggtg 401 tttaaagatc cgttttattc aagttggatg acatagtgaa gtcatctgtg 451 ttatatcata tatatattgt ctaatgctat ttgactctac tgtataatat 501 gtatgctatt agacatagac gtgggtcctc ctttactcaa agacatccat 551 atgcacgtta taatgctgtc aagcgttcat caattgttaa acgggttaat 601 gggaaacgtc atcattcatt tgtctggaag gcccatgatg agcccaaagt 651 ggaggcccaa cggatccgtg aacatcaata tggaccagat ttcgtattgg 701 cccataattc agccatatct acgtttatca gttatccaag tttaggtaag 751 actcaaccga accggagtag atcctacatt aagttgaaac gtctacgttt 801 caagggaacg gtgaagattg agcgtgttca gcctgatatg aacatggacg 851 gttctccccc taaggttgag ggagttttct ctcttgttat agtcgtggat 901 cgcaaacccc acttgggtgc aactgggtgc cttcatacgt tcgacgaact 951 attcggtgct aggatccaca gccatggtaa cctcagtata accccttcgt 1001 tgaaagaccg tttctacata agacacgtgt tcaaacgtgt attgtctgtg 1051 gagaaagata caacaatggt tgacttggaa ggctcgacaa tgctctctaa 1101 caggcgtttc aattgttggt ctacctttaa agatattgac catgattcat 1151 gtaatggtgt ttatggcaat attagcaaga acgcgctgtt agtttattat 1201 tgttggatgt cagatacgat atctaaggca tctacatttg tatcatttga 1251 tctagattat gttggatgag taataaaatt taatatgtat tccatatatt 1301 gaataatcta ttaatgaaat aaccaataat gatatttatt ttaatgactt 1351 gggctgtgaa gccttacaat tactgtttat acactcgtgt accgtagtcc 1401 taactaattc gtttaattgg cccattgtca ttgtgatgtt ggaatccgct 1451 ttctgtgctc ctacaactga tgcagactct cctgtgtcta atattgttgt 1501 tcctagtctg tttaggtgcc tgtatggatg tatctcgttc tgctcttcgg 1551 agtctgcatc tgaaagccca ttacccaatg tacttctaga agcccatgat 1601 tcacctggcc ttatttcaat tgggcctcta agcccaagtc tcgacatgga 1651 tgcgcatctg atgggcttcc gttcccattt cccatagtcg acatgtgaaa 1701 agtccacatc tttatcagtg aactgtttgg ataatatctt taccgttggt 1751 gcccggaagg ggatatccac tgagtgtttc gccgtcgaga gcttcagttt 1801 ccctttgaac ttcgcgaagt gagttctctg gtgcacattt gtatcacaaa 1851 ctctgtaata cagtttccat ggaatcgggt ccttcaatga gaaaaacgaa 1901 gccgagaaat aatggagatc tatgttgcat ctgattggga aagtccatga 1951 tgattgtaga gattcgttgt ctgtcattct tttgtcgtgg atctccacta 2001 tcactgaacc cgtggcgtta atcggaacct gttgcctgta ttctatgacg 2051 caatggtcga tcttcatgca gctccggcta agtctagctg ttaactgtga 2101 tgccgtcgac gggaattgca ttattatctc agttaagtca tgagaaagct 2151 gatactcgtc tcggtgagac tctatgtaat tgaatgcgtt aggaggatta 2201 actaactgag aatccatata ttaaaaataa gtccgcgcag cggcaccctt 2251 acagaaaatt atctatgcgg aagagatgat aaggcagcta atgaagagct 2301 tttttaagaa gaattgcgtg tctggtatag atatgcatat gtctatttat 2351 aaatatttgt gtttaatcta aacaatgagt gttcattccc gagttgtagt 2401 gagagaactt cttggtagtg gcatatttgt aattaatggg tgtactccaa 2451 ttgagctcct ctcaaacttg gtgaatcaat tggagtattg gagtacaatt 2501 tatactaaaa cctcagatag cgcttggaga cacgtggcgg ccatccgttt 2551 ataatatt