Sequence of DPV Tomato golden mottle virus

Tomato golden mottle virus segment B, complete sequence.

ACC No: DQ406674

Dated: 2006-03-25 | Length: 2558 | CRC: -273924419

                ID   DQ406674   standard; circular genomic DNA; VRL; 2558 BP.
XX
AC   DQ406674;
XX
SV   DQ406674.1
XX
DT   25-MAR-2006 (Rel. 87, Created)
DT   25-MAR-2006 (Rel. 87, Last updated, Version 1)
XX
DE   Tomato golden mottle virus segment B, complete sequence.
XX
KW   .
XX
OS   Tomato golden mottle virus
OC   Viruses; ssDNA viruses; Geminiviridae; Begomovirus.
XX
RN   [1]
RP   1-2558
RA   Mauricio-Castillo J.A., Arguello-Astorga G.R., Alpuche-Solis A.G.;
RT   "First report of Tomato golden mottle virus in Mexico";
RL   Unpublished.
XX
RN   [2]
RP   1-2558
RA   Mauricio-Castillo J.A., Arguello-Astorga G.R., Alpuche-Solis A.G.;
RT   ;
RL   Submitted (18-FEB-2006) to the EMBL/GenBank/DDBJ databases.
RL   Molecular Biology, Instituto Potosino de Investigacion Cientifica y
RL   Tecnologica, Camino a la Presa San Jose 2055, San Luis Potosi, SLP 78231,
RL   Mexico
XX
FH   Key             Location/Qualifiers
FH
FT   source          1. .2558
FT                   /organism="Tomato golden mottle virus"
FT                   /segment="B"
FT                   /specific_host="tomato"
FT                   /isolate="SLP"
FT                   /mol_type="genomic DNA"
FT                   /country="Mexico:San Luis Potosi"
FT                   /collection_date="2005"
FT                   /db_xref="taxon:223342"
FT   gene            499. .1269
FT                   /gene="BV1"
FT   CDS             499. .1269
FT                   /codon_start=1
FT                   /gene="BV1"
FT                   /product="nuclear shuttle protein"
FT                   /note="nuclear transporter; NSP; BR1"
FT                   /protein_id="ABD84429.1"
FT                   /translation="MYAIRHRRGSSFTQRHPYARYNAVKRSSIVKRVNGKRHHSFVWKA
FT                   HDEPKVEAQRIREHQYGPDFVLAHNSAISTFISYPSLGKTQPNRSRSYIKLKRLRFKGT
FT                   VKIERVQPDMNMDGSPPKVEGVFSLVIVVDRKPHLGATGCLHTFDELFGARIHSHGNLS
FT                   ITPSLKDRFYIRHVFKRVLSVEKDTTMVDLEGSTMLSNRRFNCWSTFKDIDHDSCNGVY
FT                   GNISKNALLVYYCWMSDTISKASTFVSFDLDYVG"
FT   gene            complement(1336. .2217)
FT                   /gene="BC1"
FT   CDS             complement(1336. .2217)
FT                   /codon_start=1
FT                   /gene="BC1"
FT                   /product="movement protein"
FT                   /note="cell-to-cell movement protein; MP; BL1"
FT                   /protein_id="ABD84430.1"
FT                   /translation="MDSQLVNPPNAFNYIESHRDEYQLSHDLTEIIMQFPSTASQLTAR
FT                   LSRSCMKIDHCVIEYRQQVPINATGSVIVEIHDKRMTDNESLQSSWTFPIRCNIDLHYF
FT                   SASFFSLKDPIPWKLYYRVCDTNVHQRTHFAKFKGKLKLSTAKHSVDIPFRAPTVKILS
FT                   KQFTDKDVDFSHVDYGKWERKPIRCASMSRLGLRGPIEIRPGESWASRSTLGNGLSDAD
FT                   SEEQNEIHPYRHLNRLGTTILDTGESASVVGAQKADSNITMTMGQLNELVRTTVHECIN
FT                   SNCKASQPKSLK"
XX
SQ   Sequence 2558 BP; 685 A; 491 C; 549 G; 833 T; 0 other;

dq406674 Length: 2558  25-MAR-2006  Type: N  Check: 7370  ..

       1  accggatggc cgcgcgattt tttacccgac ccggccctgt aaaaaatgac
      51  cccgccctct ttttctcttt ttatcgtgac agctgtttcg cacttaatag
     101  cccactttcg tggtaccttc attgaaatac gtggcacttt gtatgatgac
     151  cctgaaattt agtggcacgt ctttctagat gttgaacttt aatttaaaat
     201  ttgaataaat gacccactgt gtgtgggcgc tgagatttag tggcacgtct
     251  ttctatgtgt taaattataa tgtagaaatt gactgggtac gtgtgtcgtt
     301  tacaatcgtg tattgactaa cgaaagacgt ggatatttat aagccataac
     351  gatgagtcta cttaagatat gtgtctagga aggtcgtcta tataatggtg
     401  tttaaagatc cgttttattc aagttggatg acatagtgaa gtcatctgtg
     451  ttatatcata tatatattgt ctaatgctat ttgactctac tgtataatat
     501  gtatgctatt agacatagac gtgggtcctc ctttactcaa agacatccat
     551  atgcacgtta taatgctgtc aagcgttcat caattgttaa acgggttaat
     601  gggaaacgtc atcattcatt tgtctggaag gcccatgatg agcccaaagt
     651  ggaggcccaa cggatccgtg aacatcaata tggaccagat ttcgtattgg
     701  cccataattc agccatatct acgtttatca gttatccaag tttaggtaag
     751  actcaaccga accggagtag atcctacatt aagttgaaac gtctacgttt
     801  caagggaacg gtgaagattg agcgtgttca gcctgatatg aacatggacg
     851  gttctccccc taaggttgag ggagttttct ctcttgttat agtcgtggat
     901  cgcaaacccc acttgggtgc aactgggtgc cttcatacgt tcgacgaact
     951  attcggtgct aggatccaca gccatggtaa cctcagtata accccttcgt
    1001  tgaaagaccg tttctacata agacacgtgt tcaaacgtgt attgtctgtg
    1051  gagaaagata caacaatggt tgacttggaa ggctcgacaa tgctctctaa
    1101  caggcgtttc aattgttggt ctacctttaa agatattgac catgattcat
    1151  gtaatggtgt ttatggcaat attagcaaga acgcgctgtt agtttattat
    1201  tgttggatgt cagatacgat atctaaggca tctacatttg tatcatttga
    1251  tctagattat gttggatgag taataaaatt taatatgtat tccatatatt
    1301  gaataatcta ttaatgaaat aaccaataat gatatttatt ttaatgactt
    1351  gggctgtgaa gccttacaat tactgtttat acactcgtgt accgtagtcc
    1401  taactaattc gtttaattgg cccattgtca ttgtgatgtt ggaatccgct
    1451  ttctgtgctc ctacaactga tgcagactct cctgtgtcta atattgttgt
    1501  tcctagtctg tttaggtgcc tgtatggatg tatctcgttc tgctcttcgg
    1551  agtctgcatc tgaaagccca ttacccaatg tacttctaga agcccatgat
    1601  tcacctggcc ttatttcaat tgggcctcta agcccaagtc tcgacatgga
    1651  tgcgcatctg atgggcttcc gttcccattt cccatagtcg acatgtgaaa
    1701  agtccacatc tttatcagtg aactgtttgg ataatatctt taccgttggt
    1751  gcccggaagg ggatatccac tgagtgtttc gccgtcgaga gcttcagttt
    1801  ccctttgaac ttcgcgaagt gagttctctg gtgcacattt gtatcacaaa
    1851  ctctgtaata cagtttccat ggaatcgggt ccttcaatga gaaaaacgaa
    1901  gccgagaaat aatggagatc tatgttgcat ctgattggga aagtccatga
    1951  tgattgtaga gattcgttgt ctgtcattct tttgtcgtgg atctccacta
    2001  tcactgaacc cgtggcgtta atcggaacct gttgcctgta ttctatgacg
    2051  caatggtcga tcttcatgca gctccggcta agtctagctg ttaactgtga
    2101  tgccgtcgac gggaattgca ttattatctc agttaagtca tgagaaagct
    2151  gatactcgtc tcggtgagac tctatgtaat tgaatgcgtt aggaggatta
    2201  actaactgag aatccatata ttaaaaataa gtccgcgcag cggcaccctt
    2251  acagaaaatt atctatgcgg aagagatgat aaggcagcta atgaagagct
    2301  tttttaagaa gaattgcgtg tctggtatag atatgcatat gtctatttat
    2351  aaatatttgt gtttaatcta aacaatgagt gttcattccc gagttgtagt
    2401  gagagaactt cttggtagtg gcatatttgt aattaatggg tgtactccaa
    2451  ttgagctcct ctcaaacttg gtgaatcaat tggagtattg gagtacaatt
    2501  tatactaaaa cctcagatag cgcttggaga cacgtggcgg ccatccgttt
    2551  ataatatt