Sequence of DPV Pelargonium flower break virus
Pelargonium flower break virus isolate CZ clone 1 putative movement protein (p7), putative movement protein (p12), and coat protein (CP) genes, complete cds.
ACC No: DQ443028
Dated: 2006-08-01 | Length: 1828 | CRC: 1847051921
ID DQ443028; SV 1; linear; genomic RNA; STD; VRL; 1828 BP.
XX
AC DQ443028;
XX
DT 06-APR-2006 (Rel. 87, Created)
DT 01-AUG-2006 (Rel. 88, Last updated, Version 2)
XX
DE Pelargonium flower break virus isolate CZ clone 1 putative movement protein
DE (p7), putative movement protein (p12), and coat protein (CP) genes,
DE complete cds.
XX
KW .
XX
OS Pelargonium flower break virus
OC Viruses; ssRNA positive-strand viruses, no DNA stage; Tombusviridae;
OC Carmovirus.
XX
RN [1]
RP 1-1828
RX PUBMED; 16873268.
RA Rico P., Ivars P., Elena S.F., Hernandez C.;
RT "Insights into the selective pressures restricting pelargonium flower break
RT virus genome variability: evidence for host adaptation";
RL J. Virol. 80(16):8124-8132(2006).
XX
RN [2]
RP 1-1828
RA Rico P., Ivars P., Elena S.F., Hernandez C.;
RT ;
RL Submitted (06-MAR-2006) to the EMBL/GenBank/DDBJ databases.
RL Biologia del estres, Instituto de Biologia Molecular y Celular de Plantas,
RL Avda. de los Naranjos s/n, Valencia, Valencia 46022, Spain
XX
FH Key Location/Qualifiers
FH
FT source 1. .1828
FT /organism="Pelargonium flower break virus"
FT /specific_host="Pelargonium"
FT /isolate="CZ"
FT /mol_type="genomic RNA"
FT /country="Czech Republic"
FT /clone="1"
FT /db_xref="taxon:35291"
FT gene 193. .399
FT /gene="p7"
FT CDS 193. .399
FT /codon_start=1
FT /gene="p7"
FT /product="putative movement protein"
FT /db_xref="GOA:Q70WT9"
FT /db_xref="InterPro:IPR007982"
FT /db_xref="UniProtKB/TrEMBL:Q70WT9"
FT /protein_id="ABD93286.1"
FT /translation="MASKVIVPDLGSDNEIDVSVGGRGNRGKQKGKISVAKDAVSKRTS
FT DGGNGGSWVVVAETVSVNIHFNF"
FT gene 233. .553
FT /gene="p12"
FT CDS 233. .553
FT /codon_start=1
FT /gene="p12"
FT /product="putative movement protein"
FT /db_xref="UniProtKB/TrEMBL:Q1PGG9"
FT /protein_id="ABD93287.1"
FT /translation="MRLTCQWEDVGTGENRRVRYPSQRTLSPSGHLMVVMGVLGLLWLR
FT PFRLIYTSTFSMPPLINLQHILNLTLLSLILSSFILAERVTHNQYSNDNSKAQYIRIST
FT GQ"
FT gene 555. .1592
FT /gene="CP"
FT CDS 555. .1592
FT /codon_start=1
FT /gene="CP"
FT /product="coat protein"
FT /db_xref="GOA:Q1PGG8"
FT /db_xref="UniProtKB/TrEMBL:Q1PGG8"
FT /protein_id="ABD93288.1"
FT /translation="MDAYKNDPIVRQAVAKGVAWAVKLNTRGWSSLTTQQKKAARSALS
FT VIQSPAVVVPRRTRVRNPVPAGLKSGNGKAGKSSTLTRSEFICNVSSTTGVTPTFQSWT
FT INPREVKSFPQSSVCSVGYNKYRITDFRIRFSTSCSDTMNGKVAIGFTPDSSDPVPVDK
FT SQLYGMQVYADTPAKESVTLKTAADNTIRFLRDSSSDDAKLVDYGRVVLATYGFDNTAP
FT SVIGELFFEYTVVYLDPTYVVALTQHGTLATSSGPPYATLTTTATSTSMELNTHGKWLV
FT VWVSADEVINSPVISGSGASGSVTVVSDAQTTVVAVVTANLPGAVISNTSTAAPSSLEW
FT YVSRL"
XX
SQ Sequence 1828 BP; 462 A; 446 C; 482 G; 438 T; 0 other;
dq443028 Length: 1828 01-AUG-2006 Type: N Check: 2524 ..
1 atcaggaacg tacaggttag cccagaattc ttctcgggcc tatggttcag
51 ttagcgagat ggcgcgtttc agtttcttcc tagcatttgg agttatccca
101 gatgcccaaa ttgccttgga gaaacacata agagacatgc ccgtcgcagc
151 tgaatttggg cccgatgaaa gtctggcaga ccacacaatt gaatggcttc
201 taaagtgatc gttcctgatt tgggtagtga caatgagatt gacgtgtcag
251 tgggaggacg tgggaacagg ggaaaacaga agggtaagat atccgtcgca
301 aaggacgctg tctccaagcg gacatctgat ggtggtaatg ggggttcttg
351 ggttgttgtg gctgagaccg tttcggttaa tatacacttc aacttttagt
401 atgccccctc tgataaacct ccaacacata ctgaatctta ccttgttgtc
451 cctgattcta agttctttca tcttggcaga gagagtaacg cacaatcagt
501 actcaaacga caacagcaaa gcgcaatata tacggatctc aactggtcaa
551 taatatggac gcctacaaga atgacccaat agttaggcag gccgtggcaa
601 agggagtagc ttgggcggtt aagctgaata ctagagggtg gtcttcattg
651 accacccaac agaagaaagc tgcgcgctca gctctgtctg tgatacaatc
701 ccccgcggtg gttgtacctc gcagaaccag agtacgaaac ccagtacccg
751 caggcctgaa atctgggaat ggcaaggcag ggaagagctc aaccttaacc
801 cgatcggagt ttatctgcaa cgtatcgagc acaaccgggg tgaccccgac
851 tttccaatca tggaccataa atcctaggga ggtcaaaagt ttcccacaat
901 cttccgtctg ctcggttggc tacaacaagt acaggatcac ggacttcagg
951 attaggtttt ccacctcctg ttccgacact atgaatggga aggtggccat
1001 tggcttcact cctgattcta gtgatccggt tcctgttgat aagtcacagc
1051 tgtacggaat gcaggtgtat gctgacactc cagcaaagga gtcagtcacc
1101 ttgaagacgg ctgcagataa cacgatcagg ttcctgcggg attcatccag
1151 cgatgatgcc aagctggtgg attatggccg cgtagtttta gccacatacg
1201 gtttcgacaa cacagctcca tcagtaatag gagagctgtt cttcgaatat
1251 accgtagttt atctcgaccc tacctatgtc gtggctttaa cacaacatgg
1301 cacgttggcc acctcatctg gccccccata tgctaccttg accaccactg
1351 ccacttcaac atctatggaa ttgaacaccc atggaaagtg gctagtggtt
1401 tgggtctcgg cagacgaggt gatcaactct ccggttatat ccgggtccgg
1451 ggcaagcgga tccgtaactg tcgttagcga cgcacaaact actgttgttg
1501 cagtggttac cgcaaacttg ccaggcgccg tcatttccaa cacttcaacc
1551 gctgcccctt cgtcactgga gtggtacgta tctaggctat gagagggcag
1601 tcaccctacc ttctgccaga ggttcccgga ggagtagtga tcctttgggg
1651 gtgattcata gcttggaaag gtcggagagt tggagggagg ccaactgggg
1701 gaggtgctgg gagcaccaga ggcagtagag caaaaatccg ggtttcatcg
1751 cctggtgcgg gcgctcaatg ctgctaacaa gttcctgaag gaagaaaggt
1801 tttggtcgat ggagacctta acccgccc