Sequence of DPV Pelargonium flower break virus
Pelargonium flower break virus isolate KN2 clone 1 putative movement protein (p7), putative movement protein (p12), and coat protein (CP) genes, complete cds.
ACC No: DQ443032
Dated: 2006-08-01 | Length: 1828 | CRC: 1912705135
ID DQ443032; SV 1; linear; genomic RNA; STD; VRL; 1828 BP. XX AC DQ443032; XX DT 06-APR-2006 (Rel. 87, Created) DT 01-AUG-2006 (Rel. 88, Last updated, Version 2) XX DE Pelargonium flower break virus isolate KN2 clone 1 putative movement DE protein (p7), putative movement protein (p12), and coat protein (CP) genes, DE complete cds. XX KW . XX OS Pelargonium flower break virus OC Viruses; ssRNA positive-strand viruses, no DNA stage; Tombusviridae; OC Carmovirus. XX RN [1] RP 1-1828 RX PUBMED; 16873268. RA Rico P., Ivars P., Elena S.F., Hernandez C.; RT "Insights into the selective pressures restricting pelargonium flower break RT virus genome variability: evidence for host adaptation"; RL J. Virol. 80(16):8124-8132(2006). XX RN [2] RP 1-1828 RA Rico P., Ivars P., Elena S.F., Hernandez C.; RT ; RL Submitted (06-MAR-2006) to the EMBL/GenBank/DDBJ databases. RL Biologia del estres, Instituto de Biologia Molecular y Celular de Plantas, RL Avda. de los Naranjos s/n, Valencia, Valencia 46022, Spain XX FH Key Location/Qualifiers FH FT source 1. .1828 FT /organism="Pelargonium flower break virus" FT /specific_host="Pelargonium" FT /isolate="KN2" FT /mol_type="genomic RNA" FT /country="Kenya" FT /clone="1" FT /db_xref="taxon:35291" FT gene 193. .399 FT /gene="p7" FT CDS 193. .399 FT /codon_start=1 FT /gene="p7" FT /product="putative movement protein" FT /db_xref="GOA:Q70WT9" FT /db_xref="InterPro:IPR007982" FT /db_xref="UniProtKB/TrEMBL:Q70WT9" FT /protein_id="ABD93298.1" FT /translation="MASKVIVPDLGSDNEIDVSVGGRGNRGKQKGKISVAKDAVSKRTS FT DGGNGGSWVVVAETVSVNIHFNF" FT gene 233. .553 FT /gene="p12" FT CDS 233. .553 FT /codon_start=1 FT /gene="p12" FT /product="putative movement protein" FT /db_xref="UniProtKB/TrEMBL:Q1PGE5" FT /protein_id="ABD93299.1" FT /translation="MRLTCQWEDVGIGENRRVRYPSQRTLSPNGHLMVVMGVLGLLWLR FT PFRSIYTSTFSMPPLINLQHILNLTLLSLILSSFILAERVTHNQYSNDNSKAQYIRIST FT GQ" FT gene 555. .1592 FT /gene="CP" FT CDS 555. .1592 FT /codon_start=1 FT /gene="CP" FT /product="coat protein" FT /db_xref="GOA:Q1PGF9" FT /db_xref="UniProtKB/TrEMBL:Q1PGF9" FT /protein_id="ABD93300.1" FT /translation="MDAYKNDPTVRQAVARGVAWAVKLNTRGWSSLTPQQKKAARSALS FT VIQSPAVVVPRRTRVRNPVPAGLKSGNGKAGKSSTLTRSEFICNVSSTTGVTPTFQSWI FT INPREVKSFPQSSVCSVGYNKYRITDFRIRFSTSCSDTMNGKVAIGFTPDSSDPVPVDK FT SQLYGMQVYADTPAKESVTLKTAADNTIRFLRDSSSDDAKLVDYGRVVLATYGFDSTAP FT SVIGELFFEYTVVYLDPTYVVALTQHGTLTTSSGPPYATLTTTATSTSMELNTHGKWLV FT VWVSADEVINSPVISGSGASGSVTVVSDAQTTVVAVVTANLPGAIISNTSTAAPSSLEW FT YVSRL" XX SQ Sequence 1828 BP; 464 A; 445 C; 486 G; 433 T; 0 other; dq443032 Length: 1828 01-AUG-2006 Type: N Check: 214 .. 1 atcaggaacg tacaggttag cccagaattc ttctcgggcc tatggttcag 51 ttagcgagat ggcgcgtctt agtttcttcc tggcatttgg agttatccca 101 gatgctcaga ttgccttgga gaaacacata agagacatgc ccgtcgcagc 151 tgaatttggg cccgatgaaa gtctggcaga ccacacaatt gaatggcttc 201 taaagtgatc gttcctgatt tgggtagtga taatgagatt gacgtgtcag 251 tgggaggacg tgggaatagg ggaaaacaga agggtaagat atccgtcgca 301 aaggacgctg tctccaaacg gacatctgat ggtggtaatg ggggttcttg 351 ggttgttgtg gctgagaccg tttcggtcaa tatacacttc aacttttagc 401 atgccccctc tgataaacct ccaacacata ctgaatctta ctttgttgtc 451 cctgattcta agttctttca tcttggcaga gagagtaacg cacaatcagt 501 actcaaacga caacagcaaa gcgcaatata tacggatctc aactgggcaa 551 taacatggac gcctacaaga atgacccaac agttaggcag gcagtggcaa 601 ggggagtagc gtgggcggtt aagctgaaca ctagagggtg gtcttcgttg 651 accccccaac agaagaaagc tgcgcgctca gctctgtctg tgatacaatc 701 cccagcggtg gttgtacctc gcagaaccag agtacgaaac ccagtacccg 751 cgggcctgaa atcagggaat ggcaaggcag ggaaaagctc aactctaacc 801 cgatcggagt ttatctgcaa cgtatcgagc acaaccgggg tgaccccgac 851 tttccaatca tggatcataa atcctaggga ggtcaaaagt ttcccacaat 901 cttccgtctg ctcggttggc tacaacaagt acaggattac ggacttcagg 951 attaggtttt ctacttcctg ttccgacact atgaatggga aggtggccat 1001 tggcttcact cctgactcta gcgatccggt acctgttgat aagtcacagc 1051 tgtacggaat gcaggtgtat gccgacactc cagcaaagga gtcggtcacc 1101 ttgaagacgg ctgcagataa cacgattagg ttcctgcggg attcatccag 1151 cgatgatgcc aagctggtgg attatggccg cgtagtttta gccacatacg 1201 gtttcgatag cacagctcca tcagtaatag gagagctgtt cttcgagtac 1251 accgtagttt atctcgaccc tacctatgtc gtggctttaa cacaacatgg 1301 cacgttgacc acctcatctg gccccccata tgctaccttg accaccactg 1351 ccacttcaac atccatggaa ttaaacaccc atggaaagtg gctagtggtt 1401 tgggtctcgg cagacgaggt gatcaactct ccggttatat ccgggtccgg 1451 ggcaagcgga tccgtaactg tcgttagcga cgcacagact actgttgttg 1501 cagtggttac cgcaaacttg ccaggcgcca tcatttccaa cacttcaacc 1551 gctgcccctt cgtcactgga gtggtacgta tctaggctat gagagggcag 1601 tcaccctacc ttctgccaga ggttcccgga ggagtagtga tcctttgggg 1651 gtgattcata gctaggaaag gtcggagagt tggaaggagg ccaactgggg 1701 gaggtgctag gagcaccaga ggcagtagag caaaaatccg ggtttcatcg 1751 cctggtgcgg gcgctcaatg ctgctaacaa gttcctgaag gaagaaaggt 1801 tttggtcgat ggagacctta acccgccc