Sequence of DPV Citrus tristeza virus
Citrus tristeza virus clone 15.10 capsid protein gene, partial cds.
ACC No: DQ660343
Dated: 2007-06-01 | Length: 669 | CRC: 1249269562
ID DQ660343; SV 1; linear; genomic RNA; STD; VRL; 669 BP. XX AC DQ660343; XX DT 01-JUN-2007 (Rel. 92, Created) DT 01-JUN-2007 (Rel. 92, Last updated, Version 1) XX DE Citrus tristeza virus clone 15.10 capsid protein gene, partial cds. XX KW . XX OS Citrus tristeza virus OC Viruses; ssRNA positive-strand viruses, no DNA stage; Closteroviridae; OC Closterovirus. XX RN [1] RP 1-669 RA Silva G., Fonseca F., Santos C., Nolasco G.; RT "Presence of CTV in Angola and S. Tome and Principe: Characterization of RT isolates based on coat protein gene analysis"; RL Unpublished. XX RN [2] RP 1-669 RA Silva G., Fonseca F., Santos C., Nolasco G.; RT ; RL Submitted (29-MAY-2006) to the EMBL/GenBank/DDBJ databases. RL CDCTPV, UAlg, Campus de Gambelas, Faro 8005-139, Portugal XX FH Key Location/Qualifiers FH FT source 1. .669 FT /organism="Citrus tristeza virus" FT /specific_host="sweet orange" FT /mol_type="genomic RNA" FT /country="Sao Tome and Principe" FT /clone="15.10" FT /db_xref="taxon:12162" FT CDS 1. .>669 FT /codon_start=1 FT /product="capsid protein" FT /protein_id="ABG56400.1" FT /translation="MDDETKKLKNKNKETKEGDDVVAAESSFGSLNLHIDPTLIAMNDV FT RQLGTQQNAALNRDLFLTLKGKYPNLPDKDKDFHIAMMLYRLAVKSSSLQSDDDTTGVT FT YTREGVEVELSDKLWTDVVFNSKGIGNRTNALRVWGRTNDALYLAFCRQNRNLSYGGRP FT LDAGIPAGYHYLCADFLTGAGLTDLECAVYLQAKEQLLKKRGADEVVVTNVRQLGKFNT FT R" XX SQ Sequence 669 BP; 197 A; 124 C; 169 G; 179 T; 0 other; dq660343 Length: 669 01-JUN-2007 Type: N Check: 3709 .. 1 atggacgacg aaacaaagaa attgaagaac aaaaacaagg aaacgaaaga 51 aggcgacgat gttgttgcag ctgagtcttc tttcggttcg ttaaacttac 101 acatcgatcc gactctgata gcgatgaacg atgtgcgtca gttgggtacc 151 caacagaatg ctgctttgaa tagagatctg tttcttacct tgaaagggaa 201 gtatcccaac ttacctgaca aagataaaga ctttcacata gctatgatgt 251 tatatcgttt agcagttaag agttcatcat tacaaagcga cgatgatacc 301 acgggtgtga cgtacactcg ggaaggtgtt gaagtggagt tgtctgacaa 351 actttggaca gacgtcgtgt ttaactctaa gggtattggt aaccgtacta 401 acgcccttcg agtctggggt agaactaacg atgcccttta tttggctttt 451 tgtagacaga accgcaactt gagttatggt ggacgtccgt tagatgcagg 501 aattccagcc gggtatcact acctgtgtgc agatttcttg accggagctg 551 gcttgactga tttagaatgt gcagtgtact tacaagctaa agagcaatta 601 ttaaagaagc gaggggctga tgaggtcgta gttactaatg tcaggcagct 651 tgggaaattc aacacacgt