Sequence of DPV Citrus tristeza virus
Citrus tristeza virus clone 15.14 capsid protein gene, partial cds.
ACC No: DQ660345
Dated: 2007-06-01 | Length: 669 | CRC: -513331843
ID DQ660345; SV 1; linear; genomic RNA; STD; VRL; 669 BP. XX AC DQ660345; XX DT 01-JUN-2007 (Rel. 92, Created) DT 01-JUN-2007 (Rel. 92, Last updated, Version 1) XX DE Citrus tristeza virus clone 15.14 capsid protein gene, partial cds. XX KW . XX OS Citrus tristeza virus OC Viruses; ssRNA positive-strand viruses, no DNA stage; Closteroviridae; OC Closterovirus. XX RN [1] RP 1-669 RA Silva G., Fonseca F., Santos C., Nolasco G.; RT "Presence of CTV in Angola and S. Tome and Principe: Characterization of RT isolates based on coat protein gene analysis"; RL Unpublished. XX RN [2] RP 1-669 RA Silva G., Fonseca F., Santos C., Nolasco G.; RT ; RL Submitted (29-MAY-2006) to the EMBL/GenBank/DDBJ databases. RL CDCTPV, UAlg, Campus de Gambelas, Faro 8005-139, Portugal XX FH Key Location/Qualifiers FH FT source 1. .669 FT /organism="Citrus tristeza virus" FT /specific_host="sweet orange" FT /mol_type="genomic RNA" FT /country="Sao Tome and Principe" FT /clone="15.14" FT /db_xref="taxon:12162" FT CDS 1. .>669 FT /codon_start=1 FT /product="capsid protein" FT /protein_id="ABG56402.1" FT /translation="MDDETKKLKNKNKETKEGDDVVAAESSFGSLNLHIDPTLIAMNDV FT RQLGTQQNAALNRDLFLTLKGKHPNLPDKDKDFHLAMMLYRLAVKSSSLQSDDDTTGIT FT YTREGVEVDLPDKLWTDVVFNSKGIGNRTNALRVWGRTNDALYLAFCRQNRNLSYGGRP FT LDAGIPAGYHYLCADFLTGAGLTDLECAVYIQAKEQLLKKRGADEVVVTNVRQLGKFNT FT R" XX SQ Sequence 669 BP; 198 A; 129 C; 163 G; 179 T; 0 other; dq660345 Length: 669 01-JUN-2007 Type: N Check: 303 .. 1 atggacgacg aaacaaagaa attgaagaac aaaaacaagg aaacgaaaga 51 aggcgacgat gttgttgccg ctgagtcttc tttcggttcc ttaaacttac 101 acatcgatcc aactctgata gcgatgaatg acgtgcgtca gttgggtacc 151 caacagaacg ctgctttaaa cagagactta tttcttactt tgaaagggaa 201 gcatcctaac ttacctgaca aagataagga ctttcactta gctatgatgt 251 tgtatcgttt agcagttaag agttcatcat tacaaagcga tgacgatact 301 acaggtataa cgtacactcg ggagggtgtt gaagtggact tgcctgacaa 351 actttggact gacgtcgtgt ttaactccaa gggtattggc aaccgtacta 401 atgcccttcg agtttggggt agaactaacg atgcccttta cttagctttt 451 tgtagacaaa atcgcaattt gagttatggc ggacgtccgc tagatgcagg 501 gattccggcc gggtatcatt acctgtgcgc agatttcttg accggagctg 551 gcttgactga tttagaatgt gctgtgtaca tacaagctaa agaacaattg 601 ttgaagaagc gaggagctga tgaagttgta gttaccaatg tcaggcagct 651 tgggaaattc aacacacgt