Sequence of DPV Citrus tristeza virus

Citrus tristeza virus clone P9 capsid protein gene, partial cds.

ACC No: DQ660352

Dated: 2007-06-01 | Length: 669 | CRC: 899826076

                
ID   DQ660352; SV 1; linear; genomic RNA; STD; VRL; 669 BP.
XX
AC   DQ660352;
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DT   01-JUN-2007 (Rel. 92, Created)
DT   01-JUN-2007 (Rel. 92, Last updated, Version 1)
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DE   Citrus tristeza virus clone P9 capsid protein gene, partial cds.
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KW   .
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OS   Citrus tristeza virus
OC   Viruses; ssRNA positive-strand viruses, no DNA stage; Closteroviridae;
OC   Closterovirus.
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RN   [1]
RP   1-669
RA   Silva G., Fonseca F., Santos C., Nolasco G.;
RT   "Presence of CTV in Angola and S. Tome and Principe: Characterization of
RT   isolates based on coat protein gene analysis";
RL   Unpublished.
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RN   [2]
RP   1-669
RA   Silva G., Fonseca F., Santos C., Nolasco G.;
RT   ;
RL   Submitted (29-MAY-2006) to the EMBL/GenBank/DDBJ databases.
RL   CDCTPV, UAlg, Campus de Gambelas, Faro 8005-139, Portugal
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FH   Key             Location/Qualifiers
FH
FT   source          1. .669
FT                   /organism="Citrus tristeza virus"
FT                   /specific_host="sweet orange"
FT                   /mol_type="genomic RNA"
FT                   /country="Angola"
FT                   /clone="P9"
FT                   /db_xref="taxon:12162"
FT   CDS             1. .>669
FT                   /codon_start=1
FT                   /product="capsid protein"
FT                   /protein_id="ABG56409.1"
FT                   /translation="MDDETKKLKNKNKETKEGDDVVAADSSFGSVNLHIDPTLIAMNDV
FT                   RQLGTQQNAALNRDLFLTLKGKYPNLPDKDKDFHLAMMLYRLAVKSSSLQSDDDTTGMT
FT                   YTREGVEVELSDKLWTDVVFNSKGIGNRTNALRVWGRSNDALYLAFCRQNRNLSCGGRP
FT                   LDAGIPAGYHYLCADFLTGAGLTDLECAVYIQAKEQLLKKRGADEVVVTNVRQLGKFNT
FT                   R"
XX
SQ   Sequence 669 BP; 198 A; 123 C; 168 G; 180 T; 0 other;

dq660352 Length: 669  01-JUN-2007  Type: N  Check: 3137  ..

       1  atggacgacg aaacaaagaa attgaagaac aaaaacaagg aaacgaaaga
      51  aggcgacgat gttgttgcag ctgactcttc tttcggttcc gtaaacttac
     101  acatcgatcc gactctgata gcgatgaacg atgtgcgtca gttgggtacc
     151  caacagaatg ctgctttgaa tagagatttg tttcttacct tgaaagggaa
     201  gtatcctaac ttacctgaca aagataaaga ctttcactta gctatgatgt
     251  tatatcgttt agcagttaag agttcatcat tacaaagcga cgatgatact
     301  acgggtatga cgtacactcg ggaaggtgtt gaagtggaat tgtctgacaa
     351  actttggaca gacgtcgtgt ttaactctaa gggtattggt aaccgtacta
     401  acgcccttcg agtctggggt agaagtaacg atgcccttta tttggctttt
     451  tgtagacaga accgcaactt gagttgtggt ggacgtccgt tagatgcagg
     501  aattccagcc gggtatcact acctgtgtgc agatttcttg accggagctg
     551  gcctgactga tttagaatgt gcagtgtaca tacaagctaa agagcaatta
     601  ttaaagaagc gaggggctga tgaggtcgta gttactaatg tcaggcagct
     651  tgggaaattc aacacacgt