Sequence of DPV Tomato leaf curl Taiwan virus
Tomato leaf curl Taiwan virus isolate LJC14-2 segment DNA A, complete sequence.
ACC No: DQ866128
Dated: 2006-09-19 | Length: 2743 | CRC: -446648403
ID DQ866128; SV 1; linear; genomic DNA; STD; VRL; 2743 BP. XX AC DQ866128; XX DT 19-SEP-2006 (Rel. 89, Created) DT 19-SEP-2006 (Rel. 89, Last updated, Version 1) XX DE Tomato leaf curl Taiwan virus isolate LJC14-2 segment DNA A, complete DE sequence. XX KW . XX OS Tomato leaf curl Taiwan virus OC Viruses; ssDNA viruses; Geminiviridae; Begomovirus. XX RN [1] RP 1-2743 RA Tsai W.S., Green S.K., Shih S.L.; RT "Molecular Identification of Taiwan Ageratum-Infecting Begomoviruses"; RL Unpublished. XX RN [2] RP 1-2743 RA Tsai W.S., Green S.K., Shih S.L.; RT ; RL Submitted (24-JUL-2006) to the EMBL/GenBank/DDBJ databases. RL Virology Unit, AVRDC-The World Vegetable Center, PO BOX 42, Shanhua, RL Tainan, Taiwan 74199, ROC XX FH Key Location/Qualifiers FH FT source 1. .2743 FT /organism="Tomato leaf curl Taiwan virus" FT /segment="DNA A" FT /specific_host="tomato" FT /isolate="LJC14-2" FT /mol_type="genomic DNA" FT /country="Taiwan:Chiayi" FT /db_xref="taxon:196093" FT gene 132. .473 FT /gene="AV2" FT CDS 132. .473 FT /codon_start=1 FT /gene="AV2" FT /product="AV2" FT /protein_id="ABI63415.1" FT /translation="MWDPLLNDFPESVHGLRCMLAIKYLHLVENTYSPDTLGYDLIRDL FT ILVIRARDYVEATRRYSHFHSRFQGSSPSELRQPIWQPCSCPHCPRHKQKEFMGESALV FT QKAQDVQDV" FT gene 292. .1065 FT /gene="AV1" FT CDS 292. .1065 FT /codon_start=1 FT /gene="AV1" FT /product="AV1" FT /note="capsid protein" FT /protein_id="ABI63416.1" FT /translation="MSKRPADIVISTPASKVRRRLNFASPYGNRVAAPTVLVTNKKSSW FT VNRPLFRKPKMYRMYKSPDVPRGCEGPCKVQSFEQRHDISHVGKVLCVSDVTRGNGLTH FT RVGKRFCVKSIYVLGKIWMDENIKTKNHTNTVMFFLVRDRRPYGTPQDFGQIFNMYDNE FT PSTATVKNDNRDRFQVLRRFQATVTGGQYACKEQALVRKFMKINNHVTYNHQEAAKYDN FT HTENALLLYMACTHASNPVYATLKIRIYFYDSVQN" FT gene complement(1062. .1466) FT /gene="AC3" FT CDS complement(1062. .1466) FT /codon_start=1 FT /gene="AC3" FT /product="AC3" FT /protein_id="ABI63417.1" FT /translation="MDSRTGELITAAQAENGVYTWTINNPLYFKITQHNQRPFLRNHDV FT TTIQVQFNYNLRKALGIHQCFIICQIWTRLQPRTSHFLRVFKYQCMKYLDNLGVISLNN FT VFRAMRHVLYNVIEGTIDAQFSHIIKCKIY" FT gene complement(1207. .1614) FT /gene="AC2" FT CDS complement(1207. .1614) FT /codon_start=1 FT /gene="AC2" FT /product="AC2" FT /protein_id="ABI63418.1" FT /translation="MRNSSPSPSHSTHVPIKVQHKIAKKRPIRRRRVDLPCGCSYYLGI FT NCASHGFSHRGTHHCSSSREWRVYLDNQQSPLFQNNTTQPETISTEPRRNDNTSSIQLQ FT PEESVGNTPVFYNLPDLDSFTTSDLAFLEGI" FT gene complement(1514. .2599) FT /gene="AC1" FT CDS complement(1514. .2599) FT /codon_start=1 FT /gene="AC1" FT /product="AC1" FT /protein_id="ABI63419.1" FT /translation="MPRAGRFSIKAKNYFLTYPDCSLTKEEALAQIQQLSTPTNKKYIK FT ICRELHQNGNPHLHVLIQFEGKYNCTNQRFFDLVSPTRSAHFHPNIQGAKSSSDVKSYI FT NKDGDTLEWGEFQIDGRSARGGQQSANDTAAKALNSGSAEAALAIIREELPKDFIFQYH FT NIKNNLDRIFAPPLEVFISPFSSSFDQVPEELVKWVAENVRDSAARPWRPMSIVVEGES FT RTGKTLWARSLGPHNYLCGHLDLSPRVYSNEAWYNVIDDVDPHYLKHFKEFMGAQRDWQ FT SNTKYGKPIQIKGGIPTIFLCNPGPTSSYKEYLDEEKNFALKDWALKNAEFITLTEPLY FT SRANQGPTQNSEEETNSQAEG" FT gene complement(2149. .2442) FT /gene="AC4" FT CDS complement(2185. .2442) FT /codon_start=1 FT /gene="AC4" FT /product="AC4" FT /protein_id="ABI63420.1" FT /translation="MGTLISTCLSNSRGSITARISDSSTWYPQPGQLISIQTFRELNQA FT PTSSPISTRMETPSNGESSRSTAEVLEEVSRALTTQPQRL" XX SQ Sequence 2743 BP; 718 A; 548 C; 632 G; 845 T; 0 other; dq866128 Length: 2743 19-SEP-2006 Type: N Check: 3633 .. 1 accggatggc cgcgaatttt ctaagtgggt cctacgcact aatgttggtc 51 ggccaataga aacgctcctt caaagcttat taacaaaaat acccgttata 101 aatacttggt ggctaagtta cagtcggtaa aatgtgggat ccacttttaa 151 atgattttcc ggagtctgta catggtctac ggtgtatgct tgccattaag 201 tatctacatc ttgtagaaaa tacatattcc ccggatactt tgggttacga 251 tcttatacgt gatttgattt tagttatccg agctagggat tatgtcgaag 301 cgacccgccg atatagtcat ttccactccc gcttccaagg ttcgtcgccg 351 tctgaacttc gccagcccat atggcaaccg tgtagctgcc cccactgtcc 401 tcgtcacaaa caaaaagagt tcatgggtga atcggccctt gttcagaaag 451 cccaagatgt acaggatgta taaaagccca gatgttcctc gtggttgtga 501 aggcccatgt aaggtacagt catttgaaca gcgtcatgat atatcccatg 551 tgggcaaggt attatgtgtg tccgatgtca cacgtggtaa tgggctgacc 601 catcgtgttg ggaagaggtt ttgtgttaag tccatttatg tgttgggtaa 651 gatatggatg gatgagaata tcaagacgaa gaatcacaca aatactgtga 701 tgttcttctt agtccgtgat agaaggcctt atggtactcc acaagatttc 751 ggtcagatct ttaatatgta tgataatgag cctagcactg caacggtgaa 801 gaatgataat agagataggt ttcaagttct ccgtcgattc caggctacgg 851 tgactggcgg tcagtatgcg tgcaaagaac aagctctagt taggaagttt 901 atgaaaatca acaaccatgt tacttataat caccaagagg ctgctaaata 951 cgataaccat acagagaatg ctttgttgtt gtatatggca tgtactcatg 1001 ccagtaatcc tgtgtatgct actttgaaaa tcagaatcta tttctatgat 1051 tctgttcaaa attaataaat tttacatttt attatatgtg aaaactgagc 1101 atcgattgtg ccctctatta cattgtatag tacatgtctc attgctctaa 1151 atacattgtt taaactaata acgcctaaat tgtctaaata cttcatacat 1201 tggtacttaa ataccctcaa gaaatgcgag gtccgaggtt gtaaacgagt 1251 ccaaatctgg caaattataa aacactggtg tattcccaac gctttcctca 1301 ggttgtagtt gaattgaact tgtattgtcg ttacgtcgtg gttccgtaga 1351 aatggtctct ggttgtgttg tgttattttg aaatagaggg gattgttgat 1401 tgtccaggta tacacgccat tctctgcttg agctgcagtg atgagttccc 1451 ctgtgcgaga atccatgtga tgcgcagtta attccaagat aatacgagca 1501 cccacaagga agatcaaccc tccgcctgcg aattggtctc ttcttcgcta 1551 ttttgtgttg gaccttgatt ggcacgtgag tagagtggct cggtgagggt 1601 gatgaattcc gcattcttta aagcccagtc tttgagtgcg aaattctttt 1651 cttcgtctaa gtactcttta tatgatgatg ttggccctgg attgcaaagg 1701 aagattgttg ggataccacc tttaatttga attggtttcc cgtatttggt 1751 gttgctttgc cagtcccttt gggcccccat gaattcttta aagtgcttta 1801 gatagtgggg atcgacgtca tcaatgacgt tataccatgc ctcattgctg 1851 tacactcttg ggcttaggtc aagatgacca cacaagtaat tgtgtgggcc 1901 tagagacctg gcccaaagtg tcttcccagt acgactctca ccctctacaa 1951 caatactcat gggtctccat ggccgcgcag cggaatccct cacgttctcg 2001 gcaacccatt ttacaagttc ttctggaact tgatcaaagg aagaagaaaa 2051 aggagaaata aaaacctcca aaggaggagc aaaaatccta tctaaattat 2101 ttttaatatt atggtattga aaaataaagt ctttagggag ttcctcccta 2151 ataatagcca gagcggcttc agcggaacct gagtttagag cctttgcggc 2201 tgtgtcgtta gcgctctgct gacctcctct agcacttctg ccgtcgatct 2251 ggaactctcc ccattcgagg gtgtctccat ccttgttgat ataggacttg 2301 acgtcggagc ttgatttagc tccctgaatg tttggatgga aatgagctga 2351 cctggttggg gataccaggt cgaagaatcg ctgattcgtg cagttatact 2401 tcccctcgaa ttggataagc acgtggagat gagggttccc attttggtgc 2451 agctctctgc agatcttgat gtatttcttg ttggttgggg tggatagttg 2501 ttgtatctgg gctagtgcct cttctttagt aagggagcaa tctggataag 2551 tgaggaaata atttttggct ttaatagaaa aacgacctgc tcttggcatt 2601 ttggatgtcg ttttggtatc ggggggcact caaagtctgt atgaatcggg 2651 ggaactgggg gacaatttat atgtgccccc taaatggcat tattgtaatt 2701 acattaattt accaaggggt aaagcggcca tccgtttaat att