Sequence of DPV Citrus tristeza virus

Citrus tristeza virus isolate HB1 coat protein gene, complete cds.

ACC No: EF028324

Dated: 2008-08-24 | Length: 672 | CRC: 888346497

                
ID   EF028324; SV 1; linear; genomic RNA; STD; VRL; 672 BP.
XX
AC   EF028324;
XX
DT   01-NOV-2006 (Rel. 89, Created)
DT   24-AUG-2008 (Rel. 96, Last updated, Version 2)
XX
DE   Citrus tristeza virus isolate HB1 coat protein gene, complete cds.
XX
KW   .
XX
OS   Citrus tristeza virus
OC   Viruses; ssRNA positive-strand viruses, no DNA stage; Closteroviridae;
OC   Closterovirus.
XX
RN   [1]
RP   1-672
RX   PUBMED; 18626763.
RA   Jiang B., Hong N., Wang G.P., Hu J., Zhang J.K., Wang C.X., Liu Y.,
RA   Fan X.D.;
RT   "Characterization of Citrus tristeza virus strains from southern China
RT   based on analysis of restriction patterns and sequences of their coat
RT   protein genes";
RL   Virus Genes 37(2):185-192(2008).
XX
RN   [2]
RP   1-672
RA   Wang C.;
RT   ;
RL   Submitted (27-SEP-2006) to the EMBL/GenBank/DDBJ databases.
RL   Fruit Virology, National Indoor Conservation Center of Virus-Free Germplasm
RL   of Fruit Crops, Huazhong Agricultural University, Wuhan, HuBei 430070,
RL   China
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FH   Key             Location/Qualifiers
FH
FT   source          1. .672
FT                   /organism="Citrus tristeza virus"
FT                   /specific_host="Citrus aurantifolia"
FT                   /isolate="HB1"
FT                   /mol_type="genomic RNA"
FT                   /country="China:Hubei"
FT                   /db_xref="taxon:12162"
FT   CDS             1. .672
FT                   /codon_start=1
FT                   /product="coat protein"
FT                   /db_xref="GOA:A0FKQ8"
FT                   /db_xref="InterPro:IPR002679"
FT                   /db_xref="UniProtKB/TrEMBL:A0FKQ8"
FT                   /protein_id="ABK20444.1"
FT                   /translation="MDDETKKLKNKNKETKEGDDVVAAESSFGSLNLHIDPTLIAMNDV
FT                   RQLGTQQNAALNRDLFLTLKGKYPNLSDKDKDFHIAMMSYRLAVKSSSLQSDGDTTGIT
FT                   YTREGVEVDLSDKLWTDVVFNSKGIGNRTNALRVWGRSNDALYLAFCRQNRNLSYGGRP
FT                   LDAGIPAGYHYLCADFLTGAGLTDLEGAVYIQAKEQLLKKRGADEVVVTNVRQLGKFNT
FT                   R"
XX
SQ   Sequence 672 BP; 192 A; 125 C; 177 G; 178 T; 0 other;

ef028324 Length: 672  24-AUG-2008  Type: N  Check: 2008  ..

       1  atggacgacg aaacaaagaa attgaagaac aaaaacaagg aaacgaagga
      51  aggcgacgat gttgttgcag cggagtcttc tttcggttcc ttaaacttac
     101  acatcgatcc gactctgata gcgatgaacg atgtgcgtca gttaggtacc
     151  caacagaacg ccgctttgaa cagagatttg ttccttactt tgaaagggaa
     201  atatcctaat ttgtctgata aagataagga ctttcacata gctatgatgt
     251  cgtatcgttt agcggttaaa agttcatcat tgcaaagtga tggcgacacc
     301  acgggcataa cgtacactcg ggagggcgtc gaagtggatt tgtctgacaa
     351  actttggact gacgtcgtgt ttaattctaa gggtatcggt aaccgtacta
     401  acgcccttcg agtctggggt agaagtaacg atgcccttta tttagcgttt
     451  tgtagacaga atcgcaattt gagttatggc ggacgtccgt tagatgcagg
     501  gattccggcc gggtatcatt acctgtgtgc agatttcttg accggagctg
     551  gcttgactga tttggaaggt gctgtgtaca tacaagctaa agaacaattg
     601  ttgaagaagc gaggggctga cgaagttgta gttaccaatg tcaggcagct
     651  tgggaaattc aacacacgtt ga