Sequence of DPV Citrus tristeza virus
Citrus tristeza virus isolate ML12 coat protein gene, complete cds.
ACC No: EF028325
Dated: 2008-08-24 | Length: 672 | CRC: -406947609
ID EF028325; SV 1; linear; genomic RNA; STD; VRL; 672 BP. XX AC EF028325; XX DT 01-NOV-2006 (Rel. 89, Created) DT 24-AUG-2008 (Rel. 96, Last updated, Version 2) XX DE Citrus tristeza virus isolate ML12 coat protein gene, complete cds. XX KW . XX OS Citrus tristeza virus OC Viruses; ssRNA positive-strand viruses, no DNA stage; Closteroviridae; OC Closterovirus. XX RN [1] RP 1-672 RX PUBMED; 18626763. RA Jiang B., Hong N., Wang G.P., Hu J., Zhang J.K., Wang C.X., Liu Y., RA Fan X.D.; RT "Characterization of Citrus tristeza virus strains from southern China RT based on analysis of restriction patterns and sequences of their coat RT protein genes"; RL Virus Genes 37(2):185-192(2008). XX RN [2] RP 1-672 RA Zhang J.; RT ; RL Submitted (27-SEP-2006) to the EMBL/GenBank/DDBJ databases. RL Fruit Virology, National Indoor Conservation Center of Virus-Free Germplasm RL of Fruit Crops, Huazhong Agricultural University, Wuhan, HuBei 430070, RL China XX FH Key Location/Qualifiers FH FT source 1. .672 FT /organism="Citrus tristeza virus" FT /specific_host="Citrus aurantifolia" FT /isolate="ML12" FT /mol_type="genomic RNA" FT /country="China:JiangXi" FT /db_xref="taxon:12162" FT CDS 1. .672 FT /codon_start=1 FT /product="coat protein" FT /db_xref="GOA:A0FKQ9" FT /db_xref="InterPro:IPR002679" FT /db_xref="UniProtKB/TrEMBL:A0FKQ9" FT /protein_id="ABK20445.1" FT /translation="MDDETKKLKNKNKETKEGDDVVAAESSFGSLNLHIDPTLIAMNDV FT RQLGTQQNAALNRDLFLTLKGKYPNLSDRDKDFHLAMMLYRLAVKSSSLQSDDDTTGIT FT YTREGVEVDLSDKLWTDVVFNSKGIGNRTNALRVWGRSNDALYLAFCRQNRNLSYGGRP FT LDAGIPAGYHYLCADFLTGAGLTDLECAVYIQAKEQLLKKRGADEVVVTNVRQLGKFNT FT R" XX SQ Sequence 672 BP; 189 A; 125 C; 179 G; 179 T; 0 other; ef028325 Length: 672 24-AUG-2008 Type: N Check: 3800 .. 1 atggacgacg aaacaaagaa attgaagaac aaaaacaagg aaacgaagga 51 aggcgacgat gttgttgcag cggagtcatc tttcggttcc ttaaacttac 101 acatcgatcc gactctgata gcgatgaacg atgtgcgtca gttaggtacc 151 caacagaacg ccgctttgaa cagagatttg ttccttactt tgaaagggaa 201 atatcctaat ttgtctgata gagataagga ctttcactta gctatgatgt 251 tgtatcgttt ggcggttaag agttcatcat tgcaaagtga tgacgacacc 301 acgggcataa cgtacactcg ggagggcgtc gaagtggatt tgtctgacaa 351 actttggact gacgtcgtgt ttaattctaa gggtatcggt aaccgtacta 401 acgcccttcg agtctggggt agaagtaacg atgcccttta tttagcgttt 451 tgtagacaga atcgcaactt gagttatggc ggacgtccgc tagatgcagg 501 gattccggcc gggtatcatt acctgtgtgc ggatttcttg accggagctg 551 gcttgactga tttggaatgt gctgtgtaca tacaagctaa agaacaattg 601 ttgaagaagc gaggggctga tgaagttgta gttaccaatg tcaggcagct 651 tgggaaattc aacacacgtt ga