Sequence of DPV Citrus tristeza virus
Citrus tristeza virus isolate ML-13 coat protein gene, complete cds.
ACC No: EF028326
Dated: 2008-08-24 | Length: 672 | CRC: -2059745600
ID EF028326; SV 1; linear; genomic RNA; STD; VRL; 672 BP. XX AC EF028326; XX DT 01-NOV-2006 (Rel. 89, Created) DT 24-AUG-2008 (Rel. 96, Last updated, Version 2) XX DE Citrus tristeza virus isolate ML-13 coat protein gene, complete cds. XX KW . XX OS Citrus tristeza virus OC Viruses; ssRNA positive-strand viruses, no DNA stage; Closteroviridae; OC Closterovirus. XX RN [1] RP 1-672 RX PUBMED; 18626763. RA Jiang B., Hong N., Wang G.P., Hu J., Zhang J.K., Wang C.X., Liu Y., RA Fan X.D.; RT "Characterization of Citrus tristeza virus strains from southern China RT based on analysis of restriction patterns and sequences of their coat RT protein genes"; RL Virus Genes 37(2):185-192(2008). XX RN [2] RP 1-672 RA Zhang J.; RT ; RL Submitted (27-SEP-2006) to the EMBL/GenBank/DDBJ databases. RL Fruit Virology, National Indoor Conservation Center of Virus-Free Germplasm RL of Fruit Crops, Huazhong Agricultural University, Wuhan, HuBei 430070, RL China XX FH Key Location/Qualifiers FH FT source 1. .672 FT /organism="Citrus tristeza virus" FT /specific_host="Citrus aurantifolia" FT /isolate="ML-13" FT /mol_type="genomic RNA" FT /country="China:JiangXi" FT /db_xref="taxon:12162" FT CDS 1. .672 FT /codon_start=1 FT /product="coat protein" FT /db_xref="GOA:A0FKR0" FT /db_xref="InterPro:IPR002679" FT /db_xref="UniProtKB/TrEMBL:A0FKR0" FT /protein_id="ABK20446.1" FT /translation="MDDETKKLKNKNKETKEGDDVVAAESSFGSVNLHIDPTLITMNDV FT RQLGTQQNAALNRDLFLALKGKYPNLPDKDKDFHLAMMLYRLAVKSSSLQSDDDTTGIT FT YTREGVEVDLSDKLWTDIVYNSKGIGNRTNALRVWGRTNDALYLAFCRQNRNLSYGGRP FT LDAGIPAGYHYLCADFLTGAGLTDLECAVYIQAKEQLLKKRGADEVVVTNVRQLGKFNT FT R" XX SQ Sequence 672 BP; 195 A; 123 C; 171 G; 183 T; 0 other; ef028326 Length: 672 24-AUG-2008 Type: N Check: 3619 .. 1 atggacgacg aaacaaagaa attgaagaac aaaaacaagg aaacgaaaga 51 aggcgacgat gttgttgctg ctgagtcttc tttcggttcc gtaaacttac 101 acatcgatcc gactctgata acgatgaacg atgtgcgtca gttaggtact 151 caacagaacg ctgctttgaa cagggactta ttccttgctc tgaaagggaa 201 gtatcctaat ttgcctgaca aagataagga ctttcactta gctatgatgt 251 tataccgttt agcggttaag agttcatcat tgcaaagtga tgatgacacc 301 acgggcataa cgtacactcg ggagggtgtt gaagtagatt tgtctgacaa 351 actttggacc gacatcgtgt ataattctaa gggtattggt aaccgaacta 401 acgcccttcg agtctggggt agaactaacg atgctcttta cttagccttt 451 tgtagacaga accgcaattt gagttatggc ggacgtccgc tagatgcagg 501 gattccggct gggtatcatt atttgtgtgc agatttcttg accggagctg 551 gcttgactga tttggaatgt gctgtgtaca tacaagctaa agaacaattg 601 ttgaaaaagc gaggggctga tgaggttgta gttactaatg tcaggcagct 651 tgggaaattc aacacacgtt ga