Sequence of DPV Citrus tristeza virus
Citrus tristeza virus isolate s4 coat protein gene, complete cds.
ACC No: EF063109
Dated: 2008-08-24 | Length: 672 | CRC: 1667100148
ID EF063109; SV 1; linear; genomic RNA; STD; VRL; 672 BP. XX AC EF063109; XX DT 18-NOV-2006 (Rel. 89, Created) DT 24-AUG-2008 (Rel. 96, Last updated, Version 2) XX DE Citrus tristeza virus isolate s4 coat protein gene, complete cds. XX KW . XX OS Citrus tristeza virus OC Viruses; ssRNA positive-strand viruses, no DNA stage; Closteroviridae; OC Closterovirus. XX RN [1] RP 1-672 RX PUBMED; 18626763. RA Jiang B., Hong N., Wang G.P., Hu J., Zhang J.K., Wang C.X., Liu Y., RA Fan X.D.; RT "Characterization of Citrus tristeza virus strains from southern China RT based on analysis of restriction patterns and sequences of their coat RT protein genes"; RL Virus Genes 37(2):185-192(2008). XX RN [2] RP 1-672 RA Wang C.; RT "Citrus tristeza virus was extracted from Citrus sinensis in the field, and RT was grafted on Citrus aurantifolia"; RL Unpublished. XX RN [3] RP 1-672 RA Wang C.; RT ; RL Submitted (16-OCT-2006) to the EMBL/GenBank/DDBJ databases. RL Fruit Virology, National Indoor Conservation Center of Virus-Free Germplasm RL of Fruit Crops, Huazhong Agricultural University, Wuhan, Hubei 430070, RL China XX FH Key Location/Qualifiers FH FT source 1. .672 FT /organism="Citrus tristeza virus" FT /isolate="s4" FT /mol_type="genomic RNA" FT /db_xref="taxon:12162" FT CDS 1. .672 FT /codon_start=1 FT /product="coat protein" FT /db_xref="GOA:A0SYP8" FT /db_xref="InterPro:IPR002679" FT /db_xref="UniProtKB/TrEMBL:A0SYP8" FT /protein_id="ABK58189.1" FT /translation="MDDETKKLKNKNKETKEGDNVVAAESSFGSVNLHIDPTLITMNDV FT RQLGTQQNAALNRDLFLTLKEKYPNLSDKDKDFHIAMMLYRLAVKSSSLQSDDDSTGIT FT YTREGVEVDLSDKLWIDVVFNSKGIGNRTNALRVWGRTNDALYLAFCRQNRNLSYGGRP FT LDAGIPAGYHYLCADFLTGAGLTDLECAVYIQAKEQLLKKRGADEVVVTNVRQLGKFNT FT R" XX SQ Sequence 672 BP; 192 A; 121 C; 174 G; 185 T; 0 other; ef063109 Length: 672 24-AUG-2008 Type: N Check: 4608 .. 1 atggacgacg aaacaaagaa attgaagaac aaaaacaagg aaacgaaaga 51 aggcgacaat gttgttgcag cggagtcttc tttcggttct gtaaacttac 101 acatcgatcc gactctgata acgatgaacg atgtgcgtca gttgggtacc 151 caacagaatg ccgctttgaa cagagatttg tttcttactt tgaaagagaa 201 gtatcctaat ttgtctgata aagataagga ctttcacata gctatgatgt 251 tgtatcgttt agcggttaag agttcatcat tgcaaagtga tgacgactct 301 acgggtataa cgtacactcg ggagggcgtc gaagtggatt tgtctgacaa 351 actttggatt gacgtcgtgt ttaattctaa gggtatcggt aaccgtacta 401 acgcccttcg agtctggggt aggactaacg atgcccttta tttagccttt 451 tgtagacaga atcgcaattt gagttatggc ggacgtccgc tagatgcagg 501 gattccggcc gggtatcatt acctgtgtgc agatttcttg accggagctg 551 gcttgactga tttagagtgt gctgtgtaca tacaagctaa agaacaattg 601 ttgaagaagc gaggggctga tgaagtcgta gttaccaatg tcaggcagct 651 tgggaaattc aacacacgtt ga