Sequence of DPV Beet soil-borne virus

Beet soil-borne virus clone pBSBV-cp061027-1 coat protein gene, complete cds.

ACC No: EF113300

Dated: 2008-04-03 | Length: 495 | CRC: 118700198

                
ID   EF113300; SV 1; linear; genomic RNA; STD; VRL; 495 BP.
XX
AC   EF113300;
XX
DT   03-MAY-2007 (Rel. 91, Created)
DT   03-APR-2008 (Rel. 95, Last updated, Version 2)
XX
DE   Beet soil-borne virus clone pBSBV-cp061027-1 coat protein gene, complete
DE   cds.
XX
KW   .
XX
OS   Beet soil-borne virus
OC   Viruses; ssRNA positive-strand viruses, no DNA stage; Pomovirus.
XX
RN   [1]
RP   1-495
RA   Wang B., Li M., Zhang J., Han C., Li D., Yu J.;
RT   "First report of Beet soil-borne virus on sugar beet in China";
RL   Plant Pathol. 57(2):389-389(2008).
XX
RN   [2]
RP   1-495
RA   Han C.;
RT   ;
RL   Submitted (10-NOV-2006) to the EMBL/GenBank/DDBJ databases.
RL   Plant Pathology, China Agricultural University, No. 2 Yuanmingyuan West
RL   Road, Beijing 100094, China
XX
FH   Key             Location/Qualifiers
FH
FT   source          1. .495
FT                   /organism="Beet soil-borne virus"
FT                   /specific_host="sugarbeet"
FT                   /mol_type="genomic RNA"
FT                   /country="China:Inner Mongolia"
FT                   /isolation_source="purified viral particles"
FT                   /clone="pBSBV-cp061027-1"
FT                   /db_xref="taxon:46436"
FT   CDS             1. .495
FT                   /codon_start=1
FT                   /product="coat protein"
FT                   /db_xref="GOA:Q4LCH5"
FT                   /db_xref="InterPro:IPR001337"
FT                   /db_xref="InterPro:IPR002035"
FT                   /db_xref="UniProtKB/TrEMBL:Q4LCH5"
FT                   /protein_id="ABN05228.1"
FT                   /translation="MVDPRYEGWNQREAIRAKKRRFVSYDTFMDLIVNWREVRVGIIEH
FT                   SATILSQVSRLGEANFYGRNKRFGRVDTNGDVFYVDLSEARIRKILDNIIIALQTTSGE
FT                   GRAKRLGKEASTTAGAEDSALNVAHQLAELAELMTSDQFIEDACFTREKFEHEVGLRWV
FT                   E"
XX
SQ   Sequence 495 BP; 140 A; 82 C; 142 G; 131 T; 0 other;

ef113300 Length: 495  03-APR-2008  Type: N  Check: 3894  ..

       1  atggttgatc cgcggtatga agggtggaac caacgtgagg ctataagagc
      51  caagaagcga aggtttgtat cttacgatac ttttatggat ttaatcgtta
     101  attggcgaga ggtgcgggtc ggtattatag agcactccgc tactatactg
     151  tcgcaggtta gtaggttggg ggaagcaaat ttttacggac gtaataagcg
     201  cttcggaaga gttgacacta acggtgacgt tttttatgtt gatttgagtg
     251  aggccaggat aagaaaaatt ttagataaca taattattgc tttacagact
     301  acttccggtg aaggacgcgc taaacgatta ggaaaggagg cgagcacgac
     351  agcaggcgca gaagatagcg ctctgaatgt ggcacatcaa ctcgccgagc
     401  tagccgagct tatgacctcc gatcagttta ttgaagacgc ttgctttacg
     451  agagaaaagt ttgagcatga agttggtttg cgctgggttg aatag