Sequence of DPV Raspberry leaf mottle virus

Raspberry mottle virus major coat protein gene, complete cds.

ACC No: EF114209

Dated: 2007-06-13 | Length: 597 | CRC: 2143847032

                
ID   EF114209; SV 1; linear; genomic RNA; STD; VRL; 597 BP.
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AC   EF114209;
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DT   07-MAR-2007 (Rel. 90, Created)
DT   13-JUN-2007 (Rel. 92, Last updated, Version 3)
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DE   Raspberry mottle virus major coat protein gene, complete cds.
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KW   .
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OS   Raspberry mottle virus
OC   Viruses; ssRNA positive-strand viruses, no DNA stage; Closteroviridae;
OC   Closterovirus.
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RN   [1]
RP   1-597
RX   PUBMED; 17448559.
RA   Tzanetakis I.E., Halgren A., Mosier N., Martin R.R.;
RT   "Identification and characterization of Raspberry mottle virus, a novel
RT   member of the Closteroviridae";
RL   Virus Res. 127(1):26-33(2007).
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RN   [2]
RP   1-597
RA   Tzanetakis I.E., Halgren A.B., Mosier N., Martin R.R.;
RT   ;
RL   Submitted (10-NOV-2006) to the EMBL/GenBank/DDBJ databases.
RL   Botany and Plant Pathology & HCRL, Oregon State University and USDA-ARS,
RL   3420 Orchard Ave, Corvallis, OR 97331, USA
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FH   Key             Location/Qualifiers
FH
FT   source          1. .597
FT                   /organism="Raspberry mottle virus"
FT                   /isolate="leaf tissue from raspberry leaf mottle at SCRI
FT                   (Scottish Crop Research Institute)"
FT                   /mol_type="genomic RNA"
FT                   /country="United Kingdom:Scotland"
FT                   /db_xref="taxon:326941"
FT   CDS             1. .597
FT                   /codon_start=1
FT                   /product="major coat protein"
FT                   /note="p22; CP"
FT                   /db_xref="GOA:A3R4A5"
FT                   /db_xref="UniProtKB/TrEMBL:A3R4A5"
FT                   /protein_id="ABO15358.1"
FT                   /translation="MAEFTIADLKEINVADNTTLSEEVEAKITKPLLAKIETANPGFDD
FT                   KGAKLLVGMILYRLALRTTSPNATFNAHDVTTYKVDGKSVKFDDEMVFGYVANHEAIPP
FT                   GIKNPLRAWGRALDQKYLKFIRPLKTTLDFNQRCNKIGLPVGYEYLCADFLTGAGLDNQ
FT                   EAAILNLGRAEALKKEVGDTGHSITSIKQLGRFST"
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SQ   Sequence 597 BP; 163 A; 137 C; 149 G; 148 T; 0 other;

ef114209 Length: 597  13-JUN-2007  Type: N  Check: 1637  ..

       1  atggcggaat tcacgatcgc agacttgaaa gaaattaatg tggcagataa
      51  caccactctt tcggaggagg tggaggcaaa gattaccaaa ccgctcctcg
     101  ctaaaatcga gaccgccaat cccggttttg atgacaaagg cgccaagttg
     151  ttagtaggga tgatacttta caggttggct ttgcgtacta cttcgcccaa
     201  cgccactttt aacgcacatg acgtcaccac ctacaaagta gatggtaaga
     251  gcgtgaaatt cgatgatgaa atggtgttcg gttacgttgc taatcacgag
     301  gctatcccac ccggtatcaa gaaccctctc agggcttggg gtcgcgcatt
     351  agatcagaaa tatctaaaat tcattcggcc gttgaagacc actttggact
     401  tcaatcagcg ttgcaataag atagggcttc ctgtaggtta tgagtacctg
     451  tgtgccgatt ttcttaccgg ggctggtttg gacaaccaag aggctgccat
     501  attgaaccta ggtagagcag aggctctcaa gaaggaggtt ggcgacaccg
     551  gtcattcgat cacctcgata aagcagttag gtcgcttttc cacctaa