Sequence of DPV Rice gall dwarf virus

Rice gall dwarf virus isolate Guang Dong segment S12, complete sequence.

ACC No: EF177263

Dated: 2011-10-26 | Length: 853 | CRC: -1493014073

                
ID   EF177263; SV 1; linear; genomic RNA; STD; VRL; 853 BP.
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AC   EF177263;
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DT   01-AUG-2007 (Rel. 92, Created)
DT   26-OCT-2011 (Rel. 110, Last updated, Version 2)
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DE   Rice gall dwarf virus isolate Guang Dong segment S12, complete sequence.
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KW   .
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OS   Rice gall dwarf virus
OC   Viruses; dsRNA viruses; Reoviridae; Sedoreovirinae; Phytoreovirus.
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RN   [1]
RP   1-853
RX   PUBMED; 21416320.
RA   Wu J., Wang C., Du Z., Cai L., Hu M., Wu Z., Li Y., Xie L.;
RT   "Identification of Pns12 as the second silencing suppressor of Rice gall
RT   dwarf virus";
RL   Sci China Life Sci 54(3):201-208(2011).
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RN   [2]
RP   1-853
RA   Fan G.C., Wu Z.J., Zhang S.B., Huang M.Y., Lin Q.Y., Xie L.H.;
RT   "Molecular Characterization of Genome Segment S12 of Rice Gall Dwarf
RT   Virus";
RL   Unpublished.
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RN   [3]
RP   1-853
RA   Fan G.C., Wu Z.J., Zhang S.B., Huang M.Y., Lin Q.Y., Xie L.H.;
RT   ;
RL   Submitted (11-DEC-2006) to the INSDC.
RL   Plant Protection, Plant Virology, Kingshan, Fuzhou, Fujian 350002, P.R.
RL   China
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FH   Key             Location/Qualifiers
FH
FT   source          1. .853
FT                   /organism="Rice gall dwarf virus"
FT                   /segment="S12"
FT                   /host="rice"
FT                   /isolate="Guang Dong"
FT                   /mol_type="genomic RNA"
FT                   /country="China"
FT                   /db_xref="taxon:10986"
FT   CDS             31. .651
FT                   /codon_start=1
FT                   /product="24K non-structural protein"
FT                   /note="nucleic acid binding protein"
FT                   /db_xref="UniProtKB/TrEMBL:A7KC30"
FT                   /protein_id="ABO76901.1"
FT                   /translation="MTSNEENPVGVQTLKPNNDAKRVFEMRKIPSSNVMRVEYTKQSKY
FT                   RTCVCPSALHFAEECPSNDVLFSVGAHRNMLCVAKAFDQTKPRGIQRGNRRNNVAKVMT
FT                   LNELMPKDESNDRKKAKTGRDKKVEKSLRGRASSSRSRGRGGFSRNGRDRRETDSQDEY
FT                   SEDNSYKSEEEFTEDETAPLTKKDMLKMMSMFQSGAKSKRRPR"
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SQ   Sequence 853 BP; 284 A; 155 C; 210 G; 204 T; 0 other;

ef177263 Length: 853  26-OCT-2011  Type: N  Check: 7048  ..

       1  ggtatttttc ttgatcgtgg aatcatcagc atgacgagca acgaggaaaa
      51  cccagttggt gttcaaactt tgaaaccaaa taatgacgca aaacgtgttt
     101  ttgaaatgag aaaaattcct tcatctaatg tgatgagagt tgaatacact
     151  aaacagtcca aatacagaac gtgtgtctgt ccctcggctt tgcattttgc
     201  agaggaatgt ccatcaaacg acgttttatt ttcagttggt gcacacagaa
     251  acatgttgtg tgtagctaaa gcatttgatc agactaaacc acgcggtata
     301  cagcgaggca acagacgtaa caatgtagct aaagttatga cgttgaatga
     351  attaatgcct aaagacgaat caaatgatcg taaaaaggca aaaactggta
     401  gagataaaaa ggtggagaag tcgctcagag gaagagcgtc ctcttcacga
     451  tcaagaggga gaggaggatt ttcacgtaat ggaagggaca ggcgtgaaac
     501  tgactctcaa gatgagtatt ctgaagataa ctcatataag tctgaagaag
     551  aattcactga agatgaaacg gctcctttga ctaagaaaga catgcttaag
     601  atgatgtcta tgtttcagtc aggagcaaaa agtaaacgaa gaccgaggta
     651  aattctcaga gccgaaccgc ggaatggccg gttccaaggt gaatcatgtt
     701  gataacgtcg tggcctgatg ctatctggcc ctcgcctatg aaaggagatg
     751  ccccctccaa ttagtaggga accacgaggc atacagctct agttgttgga
     801  acggcgtagt gaagcgatcc ccgattggtt atcgggaacg agaaaaaatt
     851  gat