Sequence of DPV Tomato yellow leaf curl virus
Tomato yellow leaf curl virus isolate recombinant Ty-1S-C.108 400dpi type VI REn and TrAP genes, complete cds; and nonfunctional Rep gene, partial sequence.
ACC No: EF423675
Dated: 2007-07-23 | Length: 835 | CRC: 636198076
ID EF423675; SV 1; linear; genomic DNA; STD; VRL; 835 BP. XX AC EF423675; XX DT 23-JUL-2007 (Rel. 92, Created) DT 23-JUL-2007 (Rel. 92, Last updated, Version 1) XX DE Tomato yellow leaf curl virus isolate recombinant Ty-1S-C.108 400dpi type DE VI REn and TrAP genes, complete cds; and nonfunctional Rep gene, partial DE sequence. XX KW . XX OS Tomato yellow leaf curl virus OC Viruses; ssDNA viruses; Geminiviridae; Begomovirus. XX RN [1] RP 1-835 RX DOI; 10.1016/j.virol.2007.03.045. RX PUBMED; 17467025. RA Garcia-Andres S., Tomas D.M., Sanchez-Campos S., Navas-Castillo J., RA Moriones E.; RT "Frequent occurrence of recombinants in mixed infections of tomato yellow RT leaf curl disease-associated begomoviruses"; RL Virology 365(1):210-219(2007). XX RN [2] RP 1-835 RA Garcia-Andres S., Tomas D.M., Sanchez-Campos S., Navas-Castillo J., RA Moriones E.; RT ; RL Submitted (02-FEB-2007) to the EMBL/GenBank/DDBJ databases. RL Fruticultura Subtropical y Fitopatologia, Estacion Experimental La Mayora, RL CSIC, Algarrobo-Costa, Malaga 29750, Spain XX FH Key Location/Qualifiers FH FT source 1. .835 FT /organism="Tomato yellow leaf curl virus" FT /isolate="recombinant Ty-1S-C.108 400dpi type VI" FT /mol_type="genomic DNA" FT /country="Spain:Malaga" FT /note="TYLCSV/TYLCV recombinant" FT /db_xref="taxon:10832" FT CDS complement(61. .465) FT /codon_start=1 FT /product="REn" FT /protein_id="ABS29953.1" FT /translation="MDSRTGELITAHQATSGVYTFEINNPLYFKITEHSQRPFLMNHDI FT ISIQIRFNHNLRKALGIHKCFLNFRIWTTLQSPTGHFLRVFRYQVYKYLNNIGVISLNN FT VIRAVDYVLFDVFENTIDVIEQHEIKYNLY" FT CDS complement(206. .613) FT /codon_start=1 FT /product="TrAP" FT /protein_id="ABS29954.1" FT /translation="MQPSSPSTSHCSQVSIKVQHKIAKKRQVRRRRVDLDCGCSYYQHL FT NCNNHGFTHRGTHHCASSNEWRLYLRDKQSPLFQDNRTQPEAISNEPRHHFHSDKIQPQ FT LEEGTGDSQMFSQLPHLDDLTVSDWSFFKSL" FT misc_feature complement(522. .>835) FT /note="nonfunctional Rep due to mutation" XX SQ Sequence 835 BP; 214 A; 160 C; 179 G; 282 T; 0 other; ef423675 Length: 835 23-JUL-2007 Type: N Check: 3494 .. 1 ttctaaccca gtgtatgcta cgttgaaaat acgtatctat ttttatgatg 51 ctgtaacaaa ttaataaaga ttgtatttta tttcatgttg ttcaattaca 101 tctattgtgt tctcaaatac atcgaataag acataatcaa ctgctctaat 151 aacattgttt aatgaaatta cacctatatt attcaaatac ttatacactt 201 gatacctaaa gactcttaaa aaatgaccag tcggagactg taaggtcgtc 251 cagatgcgga agttgagaaa acatttgtga atccccagtg ccttcctcaa 301 gttgtggttg aatcttatct gaatggaaat gatgtcgtgg ttcattagaa 351 atggcctctg gctgtgttct gttatcttga aatagagggg attgtttatc 401 tcgaaggtat aaacgccact cgttgcttga tgcgcagtga tgagttcccc 451 tgtgcgtgaa tccatgattg ttgcagttga ggtgttggta gtatgagcag 501 ccacagtcca gatctaccct tctacgcctc acttgtctct tcttggctat 551 cttgtgttgg accttgattg atacttgcga acagtggctc gtagagggtg 601 acgaaggttg cattcttgag agccccattt ttccaggata tgtttttttc 651 ttcgctagat attccctata tgaggagtag gtcctggatt gcagaggaag 701 ataggggaat ccccccttta atttgaatgg gcttcccgaa ctttgtgttg 751 ctttgccagt ccctctgggc ccccatgaat tctttgaagt gctttaaata 801 atgcgggtct acgtcatcaa tgacgttgta ccatg