Sequence of DPV Tomato yellow leaf curl virus
Tomato yellow leaf curl virus isolate recombinant MmA-C.21 130dpi type X REn and TrAP genes, complete cds; and nonfunctional Rep gene, partial sequence.
ACC No: EF423704
Dated: 2007-07-23 | Length: 837 | CRC: 54861094
ID EF423704; SV 1; linear; genomic DNA; STD; VRL; 837 BP. XX AC EF423704; XX DT 23-JUL-2007 (Rel. 92, Created) DT 23-JUL-2007 (Rel. 92, Last updated, Version 1) XX DE Tomato yellow leaf curl virus isolate recombinant MmA-C.21 130dpi type X DE REn and TrAP genes, complete cds; and nonfunctional Rep gene, partial DE sequence. XX KW . XX OS Tomato yellow leaf curl virus OC Viruses; ssDNA viruses; Geminiviridae; Begomovirus. XX RN [1] RP 1-837 RX DOI; 10.1016/j.virol.2007.03.045. RX PUBMED; 17467025. RA Garcia-Andres S., Tomas D.M., Sanchez-Campos S., Navas-Castillo J., RA Moriones E.; RT "Frequent occurrence of recombinants in mixed infections of tomato yellow RT leaf curl disease-associated begomoviruses"; RL Virology 365(1):210-219(2007). XX RN [2] RP 1-837 RA Garcia-Andres S., Tomas D.M., Sanchez-Campos S., Navas-Castillo J., RA Moriones E.; RT ; RL Submitted (02-FEB-2007) to the EMBL/GenBank/DDBJ databases. RL Fruticultura Subtropical y Fitopatologia, Estacion Experimental La Mayora, RL CSIC, Algarrobo-Costa, Malaga 29750, Spain XX FH Key Location/Qualifiers FH FT source 1. .837 FT /organism="Tomato yellow leaf curl virus" FT /isolate="recombinant MmA-C.21 130dpi type X" FT /mol_type="genomic DNA" FT /country="Spain:Malaga" FT /note="TYLCSV/TYLCV recombinant" FT /db_xref="taxon:10832" FT CDS complement(61. .465) FT /codon_start=1 FT /product="REn" FT /protein_id="ABS29967.1" FT /translation="MDLRTGEYITAHQATSGVYTFEITNPLYFTITRHNQQPFNSKYNF FT LTFQIRFNHNLRKALGIHKCFLNFRIWTTLQSPTGHFLRVFRYQVYKYLNNIGVISLNN FT VIRAVDYVLFDVFENTIDVIEQHEIKYNLY" FT CDS complement(206. .613) FT /codon_start=1 FT /product="TrAP" FT /protein_id="ABS29968.1" FT /translation="MQPSSPSTSHCSQVSIKVQHHIAKKRQVRRRRVDLDCGCSYYIHL FT DCINHGFTHRGVHHCASSNEWRLYLRDNKSPIFHDNQTQPTTIQQQIQFPNISNQVQPQ FT LEEGTGDSQMFSQLPHLDDLTVSDWSFFKSL" FT misc_feature complement(522. .>837) FT /note="nonfunctional Rep due to mutation" XX SQ Sequence 837 BP; 218 A; 152 C; 176 G; 291 T; 0 other; ef423704 Length: 837 23-JUL-2007 Type: N Check: 5194 .. 1 ttctaaccca gtgtatgcta cgttgaaaat acgtatctat ttttatgatg 51 ctgtaacaaa ttaataaaga ttgtatttta tttcatgttg ttcaattaca 101 tctattgtgt tctcaaatac atcgaataag acataatcaa ctgctctaat 151 aacattgttt aatgaaatta cacctatatt attcaaatac ttatacactt 201 gatacctaaa gactcttaaa aaatgaccag tcggagactg taaggtcgtc 251 cagatgcgga agttgagaaa acatttgtga atccccagtg ccttcctcaa 301 gttgtggttg aacctgattt gaaatgttag gaaattgtat ttgctgttga 351 atggttgttg gttgtgtctg gttatcgtga aatatagggg atttgttatc 401 tcgaaggtat aaacgccact cgttgcttga tgcgcagtga tgtactcccc 451 tgtgcgtaaa tccatggttt atgcagtcta aatgtatata gtatgaacag 501 ccacagtcca gatctaccct tctacgcctc acttgtctct tcttggcgat 551 gtggtgttgg accttgattg atacttgcga acagtggctc gtggatggtg 601 acgaaggttg cattttttat ggcccaattt ttcaaggata tgtttttttc 651 ttcgtctaga tattccctat atgaggaggt aggtcctgga ttgcagagga 701 agatagggga attccccctt taatttgaat gggcttcccg tactttgtgt 751 tgctttgcca gtccctctgg gcccccatga attctttgaa gtgctttaaa 801 taatgcgggt ctacgtcatc aatgacgttg taccatg