Sequence of DPV Citrus tristeza virus

Citrus tristeza virus clone DKG1 coat protein gene, complete cds.

ACC No: EF460127

Dated: 2007-03-27 | Length: 672 | CRC: 352692217

                
ID   EF460127; SV 1; linear; genomic RNA; STD; VRL; 672 BP.
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AC   EF460127;
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DT   27-MAR-2007 (Rel. 91, Created)
DT   27-MAR-2007 (Rel. 91, Last updated, Version 1)
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DE   Citrus tristeza virus clone DKG1 coat protein gene, complete cds.
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KW   .
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OS   Citrus tristeza virus
OC   Viruses; ssRNA positive-strand viruses, no DNA stage; Closteroviridae;
OC   Closterovirus.
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RN   [1]
RP   1-672
RA   Ghosh D.K., Aglave B.A., Bhanare K., Roy A.;
RT   "Cloning and sequencing of the coat protein gene of an Indian CTV isolate";
RL   Unpublished.
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RN   [2]
RP   1-672
RA   Ghosh D.K., Aglave B.A., Bhanare K., Roy A.;
RT   ;
RL   Submitted (27-FEB-2007) to the EMBL/GenBank/DDBJ databases.
RL   Plant Pathology, National Research Centre for Citrus, PO Box 464,
RL   Shankarnagar, Nagpur, Maharashtra 440010, India
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FH   Key             Location/Qualifiers
FH
FT   source          1. .672
FT                   /organism="Citrus tristeza virus"
FT                   /mol_type="genomic RNA"
FT                   /country="India:Nagpur"
FT                   /clone="DKG1"
FT                   /db_xref="taxon:12162"
FT   CDS             1. .672
FT                   /codon_start=1
FT                   /product="coat protein"
FT                   /protein_id="ABO40792.1"
FT                   /translation="MDDETRKWRTKTKETKGGDNVVAAESPFGSVNLHIDPTLITMNDV
FT                   RQLGTQQNAALNRDLFLTLKGKYPNLSDKDKDFHIAMMLYRLAVKSSSLQSDDDTTGIT
FT                   YTREGVEVDLSDKLWTDVVFNSKGIGNRANALRVWGRTNDALYLAFCRQNRNLSYGGRP
FT                   LDAGIPAGYHYLCADFLTGAGLTDLECAVYIQAKEQLLKKRGADEVVVTNVRQLGKFNT
FT                   R"
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SQ   Sequence 672 BP; 189 A; 126 C; 177 G; 180 T; 0 other;

ef460127 Length: 672  27-MAR-2007  Type: N  Check: 3164  ..

       1  atggacgacg aaacaaggaa atggaggacc aaaaccaagg aaacgaaagg
      51  aggcgacaat gtggttgcag cggagtctcc tttcggttct gtaaacttac
     101  acatcgatcc gactctgata acgatgaacg acgtgcgtca gttgggtacc
     151  caacagaatg ccgctttgaa cagagatttg tttcttactt tgaaagggaa
     201  gtatcctaat ttatctgata aagataagga ctttcacata gctatgatgt
     251  tgtatcgttt agcggttaag agttcatcat tgcaaagtga tgacgacact
     301  acgggtataa cgtacactcg ggagggcgtc gaagtggatt tgtctgacaa
     351  actttggact gacgtcgtgt ttaattctaa gggtatcggt aaccgtgcta
     401  acgcccttcg agtctggggt aggactaacg atgcccttta tttagccttt
     451  tgtagacaga atcgcaattt gagttatggc ggacgtccgc tagatgcagg
     501  aattccagcc gggtatcatt acctgtgtgc agatttcttg accggagctg
     551  gcttaactga tttagagtgt gctgtgtaca tacaagctaa agaacaattg
     601  ttgaagaagc gaggggctga tgaagtcgtt gttaccaatg tcaggcagct
     651  tgggaaattc aacacacgtt ga