Sequence of DPV Citrus tristeza virus

Citrus tristeza virus isolate CY89-197 coat protein gene, partial cds.

ACC No: EF491672

Dated: 2007-05-23 | Length: 669 | CRC: -1388161424

                
ID   EF491672; SV 1; linear; genomic RNA; STD; VRL; 669 BP.
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AC   EF491672;
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DT   23-MAY-2007 (Rel. 91, Created)
DT   23-MAY-2007 (Rel. 91, Last updated, Version 1)
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DE   Citrus tristeza virus isolate CY89-197 coat protein gene, partial cds.
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KW   .
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OS   Citrus tristeza virus
OC   Viruses; ssRNA positive-strand viruses, no DNA stage; Closteroviridae;
OC   Closterovirus.
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RN   [1]
RP   1-669
RA   Papayiannis L., Kyriakou A., Santos C., Nolasco G.;
RT   "Molecular characterization of Citrus tristeza virus (CTV) isolates from
RT   Cyprus on the basis of the coat protein gene";
RL   J. Plant Pathol. 89(2):281-285(2007).
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RN   [2]
RP   1-669
RA   Papayiannis L., Santos C., Kyriakou A., Nolasco G.;
RT   ;
RL   Submitted (13-MAR-2007) to the EMBL/GenBank/DDBJ databases.
RL   FERN, Univ. Algarve, Faro 8005-139, Portugal
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FH   Key             Location/Qualifiers
FH
FT   source          1. .669
FT                   /organism="Citrus tristeza virus"
FT                   /isolate="CY89-197"
FT                   /mol_type="genomic RNA"
FT                   /country="Cyprus"
FT                   /db_xref="taxon:12162"
FT   CDS             1. .>669
FT                   /codon_start=1
FT                   /product="coat protein"
FT                   /protein_id="ABQ42899.1"
FT                   /translation="MDDETKTLKNKNKETKEGVDVVAAESSFGSMNLHIDPTLIAMNDV
FT                   RQLGTQQNAALNRDLFLTLKGKYPNLPDKDKDFHLAMMLYRLAVKSSSLQSDDDATGIT
FT                   YTREGVEVDLSDKLWTDVVFNSNGIGNRTNALRVWGSTNDALYLAFCRQNRNLSYGGRP
FT                   LDAGIPAGYHYLCADFLTGAGLTDLECAVYLHAKEQLLKKRGADEVVVTNVRQLGKFNT
FT                   R"
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SQ   Sequence 669 BP; 186 A; 129 C; 174 G; 180 T; 0 other;

ef491672 Length: 669  23-MAY-2007  Type: N  Check: 4636  ..

       1  atggacgacg aaacaaagac attgaagaac aaaaacaagg agacgaaaga
      51  aggcgtcgat gttgttgcag cagagtcttc tttcggttcc atgaacttac
     101  acatcgatcc gactctgata gcgatgaacg atgtgcgtca gttgggaacc
     151  caacagaacg ccgctttgaa cagagatttg tttcttactc tgaaagggaa
     201  gtatcctaac ttgcctgaca aggataagga cttccactta gctatgatgt
     251  tatatcgttt agcggttaag agttcatcgt tgcaaagtga tgatgacgcc
     301  acgggcataa catatactcg ggagggtgtt gaagtggatt tgtctgacaa
     351  gctttggact gacgtcgtgt ttaactctaa cggtattggt aaccgtacta
     401  atgcccttcg agtctggggt agcactaacg atgcccttta tttggctttt
     451  tgtagacaga accgcaactt gagttatggt ggacgtccgt tagatgcagg
     501  aattccagcc gggtatcact acctgtgtgc agatttcttg accggagctg
     551  gcttgactga tttagaatgt gcagtgtact tacacgctaa agagcaatta
     601  ttaaagaagc gaggggctga tgaggtcgta gttactaatg tcaggcagct
     651  tgggaaattc aacacacgt