Sequence of DPV Citrus tristeza virus
Citrus tristeza virus isolate CHN-N4 coat protein gene, complete cds.
ACC No: EF517335
Dated: 2008-08-24 | Length: 672 | CRC: 1774222385
ID EF517335; SV 1; linear; genomic RNA; STD; VRL; 672 BP. XX AC EF517335; XX DT 21-APR-2007 (Rel. 91, Created) DT 24-AUG-2008 (Rel. 96, Last updated, Version 2) XX DE Citrus tristeza virus isolate CHN-N4 coat protein gene, complete cds. XX KW . XX OS Citrus tristeza virus OC Viruses; ssRNA positive-strand viruses, no DNA stage; Closteroviridae; OC Closterovirus. XX RN [1] RP 1-672 RX PUBMED; 18626763. RA Jiang B., Hong N., Wang G.P., Hu J., Zhang J.K., Wang C.X., Liu Y., RA Fan X.D.; RT "Characterization of Citrus tristeza virus strains from southern China RT based on analysis of restriction patterns and sequences of their coat RT protein genes"; RL Virus Genes 37(2):185-192(2008). XX RN [2] RP 1-672 RA Bo J.; RT "Characteristic of seriology and molecular biology of Citrus tristeza virus RT in China"; RL Unpublished. XX RN [3] RP 1-672 RA Bo J.; RT ; RL Submitted (22-MAR-2007) to the EMBL/GenBank/DDBJ databases. RL Fruit Virology, National Indoor Conservation Center of Virus-free Germplasm RL of Fruit Crops, Huazhong Agricultural University, Wuhan, Hubei 430070, RL Hongshan XX FH Key Location/Qualifiers FH FT source 1. .672 FT /organism="Citrus tristeza virus" FT /isolate="CHN-N4" FT /mol_type="genomic RNA" FT /country="China" FT /db_xref="taxon:12162" FT CDS 1. .672 FT /codon_start=1 FT /product="coat protein" FT /db_xref="GOA:A5A140" FT /db_xref="InterPro:IPR002679" FT /db_xref="UniProtKB/TrEMBL:A5A140" FT /protein_id="ABP52028.1" FT /translation="MDDETKKLKNKNKETKEGDEVVAAESSFGSVNLHIDPTLITMNDV FT RQLSTQQNAALNRDLFLALKGRYPNLPDKDKDFHIAMMLYRLAVKSSSLQSDDDTTGIT FT YTREGVEVDLSDKLWTDIVYNSKGIGNRTNALRVWGRTNDALYLAFCRQNRNLSYGGRP FT LDAGIPAGYHYLCADFLTGAGLTDLECAVYIQAKEQLLKKRGADEVVVTNVRQLGKFNT FT R" XX SQ Sequence 672 BP; 198 A; 123 C; 171 G; 180 T; 0 other; ef517335 Length: 672 24-AUG-2008 Type: N Check: 2817 .. 1 atggacgacg aaacaaagaa attgaagaac aaaaacaagg aaacgaaaga 51 aggcgacgaa gttgttgctg ctgagtcttc tttcggttcc gtaaacttac 101 acatcgatcc gactctgata acgatgaacg atgtgcgtca gttgagtact 151 caacagaatg ctgctttgaa cagggactta tttcttgctc tgaaagggag 201 gtatcctaac ttgcctgaca aagataagga ctttcacata gctatgatgt 251 tataccgatt agcggttaag agttcatcat tgcaaagtga tgacgacacc 301 acgggcataa cgtacactcg ggagggtgtt gaagtagatt tgtctgacaa 351 actttggacc gacatcgtgt ataattctaa gggtattggt aaccgaacta 401 acgcccttcg agtctggggt agaactaacg atgctcttta cttagccttt 451 tgtagacaga accgcaattt gagttatggc ggacgtccgc tagatgcagg 501 gattccggct gggtatcatt atttgtgtgc agatttcttg accggagctg 551 gcttgactga tttagaatgt gctgtgtaca tacaagctaa agaacaattg 601 ttgaaaaagc gaggggctga tgaggttgta gttactaatg tcaggcagct 651 tgggaaattc aacacacgtt ga