Sequence of DPV Potato mop-top virus

Potato mop-top virus isolate AUPo6 coat protein gene, complete cds.

ACC No: EU016676

Dated: 2007-08-01 | Length: 531 | CRC: -1840683511

                
ID   EU016676; SV 1; linear; genomic RNA; STD; VRL; 531 BP.
XX
AC   EU016676;
XX
DT   01-AUG-2007 (Rel. 92, Created)
DT   01-AUG-2007 (Rel. 92, Last updated, Version 1)
XX
DE   Potato mop-top virus isolate AUPo6 coat protein gene, complete cds.
XX
KW   .
XX
OS   Potato mop-top virus
OC   Viruses; ssRNA positive-strand viruses, no DNA stage; Pomovirus.
XX
RN   [1]
RP   1-531
RA   Chiemsombat P.;
RT   "Development of PCR methods for the detection of potato mop top virus from
RT   imported potatoes to Thailand";
RL   Unpublished.
XX
RN   [2]
RP   1-531
RA   Chiemsombat P., Pongsapich P.;
RT   ;
RL   Submitted (05-JUL-2007) to the EMBL/GenBank/DDBJ databases.
RL   Plant Pathology, Kasetsart University, Malaiman Road, Kamphaengsaen, Nakhon
RL   Pathom 73140, Thailand
XX
FH   Key             Location/Qualifiers
FH
FT   source          1. .531
FT                   /organism="Potato mop-top virus"
FT                   /specific_host="potato tuber"
FT                   /lab_host="Nicotiana glutinosa"
FT                   /isolate="AUPo6"
FT                   /serotype="PMTV"
FT                   /mol_type="genomic RNA"
FT                   /country="Thailand"
FT                   /isolation_source="Nicotiana glutinosa leaves"
FT                   /virion
FT                   /note="PCR_primers=fwd_name: PMCPF, rev_name: PMCPR"
FT                   /db_xref="taxon:37128"
FT   CDS             1. .531
FT                   /codon_start=1
FT                   /product="coat protein"
FT                   /note="nucleoprotein"
FT                   /protein_id="ABS57006.1"
FT                   /translation="MAENRGDRRAAVENRYDSWDHEQAMKAAVRKFISYNQFSAQLRNW
FT                   REARLNIIEHATSVSSQVSNLGRTHFYSRTERFGGSSLVGDKLYVCLNETRMKTALNNI
FT                   IVALQTVNGEGRARRLGPREASANTGGEDSALNEAHQLAEVDDLLTDESFLREAVFTQD
FT                   KYELVNGLRWAGA"
XX
SQ   Sequence 531 BP; 159 A; 95 C; 149 G; 128 T; 0 other;

eu016676 Length: 531  01-AUG-2007  Type: N  Check: 7670  ..

       1  atggctgaaa acagaggtga tcgaagagca gccgtcgaga atagatatga
      51  ctcttgggac catgagcagg ccatgaaggc tgccgtgagg aagtttattt
     101  cttacaatca attctcagct cagttaagaa actggcgcga agctaggtta
     151  aacataattg aacatgccac tagcgtgtcg agccaggtgt ctaatttagg
     201  tagaactcat ttctacagta gaaccgaacg ctttggtgga agttcacttg
     251  ttggtgataa attgtacgta tgtctgaatg aaaccagaat gaaaaccgcg
     301  ttgaataata taattgtagc gttgcagaca gtgaacggcg aagggcgggc
     351  aagacgatta ggtccgagag aagcttccgc gaacaccggc ggggaggata
     401  gcgctctgaa tgaggcacat caactcgcag aggtggacga tttattaact
     451  gatgaaagtt ttttaagaga agctgttttt actcaggaca aatatgagct
     501  cgtgaacggg ttacgctggg ctggtgcata g