Sequence of DPV Strawberry mild yellow edge virus

Strawberry mild yellow edge virus isolate sy04 triple gene block protein 3 (TGB3) gene, partial cds; and coat protein (cp) gene, complete cds.

ACC No: EU107086

Dated: 2007-08-29 | Length: 878 | CRC: -1955005570

                
ID   EU107086; SV 1; linear; genomic RNA; STD; VRL; 878 BP.
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AC   EU107086;
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DT   29-AUG-2007 (Rel. 93, Created)
DT   29-AUG-2007 (Rel. 93, Last updated, Version 1)
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DE   Strawberry mild yellow edge virus isolate sy04 triple gene block protein 3
DE   (TGB3) gene, partial cds; and coat protein (cp) gene, complete cds.
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KW   .
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OS   Strawberry mild yellow edge virus
OC   Viruses; ssRNA positive-strand viruses, no DNA stage; Flexiviridae;
OC   Potexvirus.
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RN   [1]
RP   1-878
RA   Yang H., Zhang Z.;
RT   "Sequence diversity of the 3' terminal genome for Strawberry mild yellow
RT   edge virus";
RL   Unpublished.
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RN   [2]
RP   1-878
RA   Yang H., Zhang Z.;
RT   ;
RL   Submitted (04-AUG-2007) to the EMBL/GenBank/DDBJ databases.
RL   College of Horticulture, Shenyang Agricultural University, Shenyang,
RL   Liaoning 110161, China
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FH   Key             Location/Qualifiers
FH
FT   source          1. .878
FT                   /organism="Strawberry mild yellow edge virus"
FT                   /isolate="sy04"
FT                   /mol_type="genomic RNA"
FT                   /country="China"
FT                   /virion
FT                   /db_xref="taxon:12187"
FT   gene            <1. .175
FT                   /gene="TGB3"
FT   CDS             <1. .175
FT                   /codon_start=2
FT                   /gene="TGB3"
FT                   /product="triple gene block protein 3"
FT                   /protein_id="ABU63408.1"
FT                   /translation="TIALVSNSGCYVHFDGRSATTTCPPGPWVESIANGLYTAGLARPH
FT                   PESECERRQSSW"
FT   gene            45. .773
FT                   /gene="cp"
FT   CDS             45. .773
FT                   /codon_start=1
FT                   /gene="cp"
FT                   /product="coat protein"
FT                   /protein_id="ABU63409.1"
FT                   /translation="MGDQPRPPAPPAPGSNPLPMGSTPPVLPGRTPNPNVNVANQVGDP
FT                   FRVLTPEELAAPIAAASNKVATREQIIQIVADLNALGFVGDPALGLFDLAFHCYDIGSS
FT                   PSAQPVGASPFGCSRMQVAAVVRNHCTLRQLCMFYAPSVWNKAVKDNRPPGNWANLQFT
FT                   PETKFAAFDFFDGVLNPASQQVALWRQPTPQEIYASATHKDVATYRAASKAHXRIXNST
FT                   LLTKGASRSTPPALMPGPDA"
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SQ   Sequence 878 BP; 184 A; 275 C; 202 G; 215 T; 2 other;

eu107086 Length: 878  29-AUG-2007  Type: N  Check: 342  ..

       1  cacaatcgcc ctggtcagta attccggttg ttacgtgcac ttcgatggga
      51  gatcagccac gaccacctgc ccccccggcc cctgggtcga atccattgcc
     101  aatgggctct acaccgccgg tcttgcccgg ccgcaccccg aatccgaatg
     151  tgaacgtcgc caatcaagtt ggtgaccctt tccgggtgct cactcctgag
     201  gaacttgctg ctccgatcgc tgctgccagt aataaggtag ccactcgcga
     251  gcaaataatc caaattgtcg ctgatctgaa cgccttgggc tttgtcggag
     301  atcctgctct gggtctcttc gacttagcct tccactgcta cgacattggt
     351  tcctcgccct cggcacaacc tgttggcgct tccccttttg gctgctcgcg
     401  catgcaagtt gccgccgtcg tccgaaatca ttgcacgctt cgccagctct
     451  gtatgttcta cgccccaagc gtttggaaca aagcagttaa ggacaatcgt
     501  cctcctggca attgggccaa tctccagttc accccggaga caaaatttgc
     551  agcttttgat ttcttcgacg gcgtgctcaa tccggccagc caacaagtcg
     601  ccctgtggcg ccagcccaca ccgcaagaga tttatgcctc agccactcat
     651  aaagatgtag ctacttatcg tgcagccagt aaggcgcacg ancgcatttn
     701  caattccacg ctcctgacta aaggagctag taggtccacg ccgcctgcgc
     751  tcatgccagg ccctgatgct taacatccgt ggattaggct taaaatggga
     801  gtttcttctc acttcttcta cccagctcca atgagtgcca tgaagtgaat
     851  ttagtactac ttaaccgtac tagtatag