Sequence of DPV Banana bunchy top virus

Banana bunchy top virus segment DNA 6, complete sequence.

ACC No: EU190970

Dated: 2011-09-22 | Length: 1087 | CRC: -110570931

                
ID   EU190970; SV 1; circular; genomic DNA; STD; VRL; 1087 BP.
XX
AC   EU190970;
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DT   16-OCT-2008 (Rel. 97, Created)
DT   22-SEP-2011 (Rel. 110, Last updated, Version 2)
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DE   Banana bunchy top virus segment DNA 6, complete sequence.
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KW   .
XX
OS   Banana bunchy top virus
OC   Viruses; ssDNA viruses; Nanoviridae; Babuvirus.
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RN   [1]
RP   1-1087
RA   Selvarajan R., Mary Sheeba M., Balasubramanian V., Rajmohan R.,
RA   Lakshmi Dhevi N., Sasireka T.;
RT   "Molecular Characterization of Geographically Different Banana bunchy top
RT   virus Isolates in India";
RL   Indian J Virol 21(2):110-116(2010).
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RN   [2]
RP   1-1087
RA   Selvarajan R., Balasubramanian V., Lakshmi Devi N., Rajmohan R., Rajesh T.,
RA   Mustaffa M.;
RT   ;
RL   Submitted (05-OCT-2007) to the INSDC.
RL   Molecular Virology Lab, National Research Centre for Banana, Thogamalai
RL   Road, Thayanur Post, Tiruchirapalli, Tamil Nadu 620102, India
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FH   Key             Location/Qualifiers
FH
FT   source          1. .1087
FT                   /organism="Banana bunchy top virus"
FT                   /segment="DNA 6"
FT                   /host="Musa sp. cultivar Virupakshi"
FT                   /mol_type="genomic DNA"
FT                   /country="India"
FT                   /db_xref="taxon:12585"
FT   stem_loop       1. .31
FT                   /note="putative"
FT   TATA_signal     223. .231
FT                   /note="putative"
FT   CDS             278. .742
FT                   /codon_start=1
FT                   /product="nuclear shuttle protein"
FT                   /db_xref="InterPro:IPR008706"
FT                   /db_xref="UniProtKB/TrEMBL:B6CJU0"
FT                   /protein_id="ABY68422.1"
FT                   /translation="MDWAESQFKTCTHGCDWKKISSDSADNRQYVPCVDFGAGRKSPRK
FT                   VLLRSIEAVFNGSFSGNNRNVRGFLYVSIRDDDGEMRPVLIVPFGGYGYHNDFYYFEGK
FT                   GKVECDISSDYVAPGIDWSRDMEVSISNSNNCNELCDLKCYVVCSLRIKE"
FT   polyA_signal    738. .743
FT                   /note="putative"
FT   polyA_signal    765. .770
FT                   /note="putative"
FT   polyA_signal    986. .991
FT                   /note="putative"
XX
SQ   Sequence 1087 BP; 370 A; 170 C; 253 G; 294 T; 0 other;

eu190970 Length: 1087  22-SEP-2011  Type: N  Check: 476  ..

       1  agcacggggg actattatta ccccccgtgc tcgggacggg acatgacgtc
      51  agcaaggatt ataatgggct ttttattagc ccatgtattg aattgggccg
     101  ggttttgtca ttttacaaaa gcccggtcca ggataagtat aatgtcacgt
     151  gccgaattaa aaggttgctt cgcctcgaag aaacctaatt tgaggttgcg
     201  tattcaatac gctaccgagt atctattaat atgtgagtct ctgccgaaac
     251  aatcagagcg aaagcaaagc agaagcgatg gattgggcgg aatcacaatt
     301  caagacttgt actcatggat gcgattggaa gaagatatca tcggattcag
     351  ccgataatcg acaatatgta ccatgcgtcg attttggagc tggaagaaag
     401  tcgcctcgca aggtacttct tagatctatt gaagctgtgt ttaacggaag
     451  cttcagcgga aataatagga acgttcgtgg atttctctac gtatcgatca
     501  gagacgatga cggagaaatg cgtccagtac tcatagtacc attcggagga
     551  tatggatatc ataatgattt ctattatttc gaaggaaagg ggaaagttga
     601  atgtgatata tcatcagatt atgttgcgcc aggaatagat tggagcagag
     651  acatggaagt tagtattagt aacagcaaca actgtaatga attatgtgat
     701  ctgaagtgtt atgttgtttg ttctttaaga atcaaggaat aaaagttgtg
     751  ctgtaatgtc tattaataaa acgtatattt gggaaattga tagttgtata
     801  aaacatacaa cacgctatga aatacaagac gctatgacaa atgtacgggt
     851  atctgaatga gttttagtat cgcttaaggg ccgcaggccc gttgaaaaat
     901  aataatcgaa ttataaacgt tagataataa tcagagatag atgatcagat
     951  aacataaaca taaacgaagt atatggcggt acaataataa aataagttaa
    1001  aaaaaaaaca taatgaatac taatctctga ttggttcaga agaaaggccc
    1051  accaactaaa aggtggggag aatgtcccga tgacgta