Sequence of DPV Banana bunchy top virus
Banana bunchy top virus segment DNA 6, complete sequence.
ACC No: EU190970
Dated: 2011-09-22 | Length: 1087 | CRC: -110570931
ID EU190970; SV 1; circular; genomic DNA; STD; VRL; 1087 BP. XX AC EU190970; XX DT 16-OCT-2008 (Rel. 97, Created) DT 22-SEP-2011 (Rel. 110, Last updated, Version 2) XX DE Banana bunchy top virus segment DNA 6, complete sequence. XX KW . XX OS Banana bunchy top virus OC Viruses; ssDNA viruses; Nanoviridae; Babuvirus. XX RN [1] RP 1-1087 RA Selvarajan R., Mary Sheeba M., Balasubramanian V., Rajmohan R., RA Lakshmi Dhevi N., Sasireka T.; RT "Molecular Characterization of Geographically Different Banana bunchy top RT virus Isolates in India"; RL Indian J Virol 21(2):110-116(2010). XX RN [2] RP 1-1087 RA Selvarajan R., Balasubramanian V., Lakshmi Devi N., Rajmohan R., Rajesh T., RA Mustaffa M.; RT ; RL Submitted (05-OCT-2007) to the INSDC. RL Molecular Virology Lab, National Research Centre for Banana, Thogamalai RL Road, Thayanur Post, Tiruchirapalli, Tamil Nadu 620102, India XX FH Key Location/Qualifiers FH FT source 1. .1087 FT /organism="Banana bunchy top virus" FT /segment="DNA 6" FT /host="Musa sp. cultivar Virupakshi" FT /mol_type="genomic DNA" FT /country="India" FT /db_xref="taxon:12585" FT stem_loop 1. .31 FT /note="putative" FT TATA_signal 223. .231 FT /note="putative" FT CDS 278. .742 FT /codon_start=1 FT /product="nuclear shuttle protein" FT /db_xref="InterPro:IPR008706" FT /db_xref="UniProtKB/TrEMBL:B6CJU0" FT /protein_id="ABY68422.1" FT /translation="MDWAESQFKTCTHGCDWKKISSDSADNRQYVPCVDFGAGRKSPRK FT VLLRSIEAVFNGSFSGNNRNVRGFLYVSIRDDDGEMRPVLIVPFGGYGYHNDFYYFEGK FT GKVECDISSDYVAPGIDWSRDMEVSISNSNNCNELCDLKCYVVCSLRIKE" FT polyA_signal 738. .743 FT /note="putative" FT polyA_signal 765. .770 FT /note="putative" FT polyA_signal 986. .991 FT /note="putative" XX SQ Sequence 1087 BP; 370 A; 170 C; 253 G; 294 T; 0 other; eu190970 Length: 1087 22-SEP-2011 Type: N Check: 476 .. 1 agcacggggg actattatta ccccccgtgc tcgggacggg acatgacgtc 51 agcaaggatt ataatgggct ttttattagc ccatgtattg aattgggccg 101 ggttttgtca ttttacaaaa gcccggtcca ggataagtat aatgtcacgt 151 gccgaattaa aaggttgctt cgcctcgaag aaacctaatt tgaggttgcg 201 tattcaatac gctaccgagt atctattaat atgtgagtct ctgccgaaac 251 aatcagagcg aaagcaaagc agaagcgatg gattgggcgg aatcacaatt 301 caagacttgt actcatggat gcgattggaa gaagatatca tcggattcag 351 ccgataatcg acaatatgta ccatgcgtcg attttggagc tggaagaaag 401 tcgcctcgca aggtacttct tagatctatt gaagctgtgt ttaacggaag 451 cttcagcgga aataatagga acgttcgtgg atttctctac gtatcgatca 501 gagacgatga cggagaaatg cgtccagtac tcatagtacc attcggagga 551 tatggatatc ataatgattt ctattatttc gaaggaaagg ggaaagttga 601 atgtgatata tcatcagatt atgttgcgcc aggaatagat tggagcagag 651 acatggaagt tagtattagt aacagcaaca actgtaatga attatgtgat 701 ctgaagtgtt atgttgtttg ttctttaaga atcaaggaat aaaagttgtg 751 ctgtaatgtc tattaataaa acgtatattt gggaaattga tagttgtata 801 aaacatacaa cacgctatga aatacaagac gctatgacaa atgtacgggt 851 atctgaatga gttttagtat cgcttaaggg ccgcaggccc gttgaaaaat 901 aataatcgaa ttataaacgt tagataataa tcagagatag atgatcagat 951 aacataaaca taaacgaagt atatggcggt acaataataa aataagttaa 1001 aaaaaaaaca taatgaatac taatctctga ttggttcaga agaaaggccc 1051 accaactaaa aggtggggag aatgtcccga tgacgta