Sequence of DPV Citrus tristeza virus

Citrus tristeza virus isolate CwS3_F nonfunctional coat protein (CP) gene, complete sequence.

ACC No: EU288082

Dated: 2008-03-02 | Length: 672 | CRC: -565372294

                
ID   EU288082; SV 1; linear; genomic RNA; STD; VRL; 672 BP.
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AC   EU288082;
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DT   02-MAR-2008 (Rel. 95, Created)
DT   02-MAR-2008 (Rel. 95, Last updated, Version 1)
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DE   Citrus tristeza virus isolate CwS3_F nonfunctional coat protein (CP) gene,
DE   complete sequence.
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KW   .
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OS   Citrus tristeza virus
OC   Viruses; ssRNA positive-strand viruses, no DNA stage; Closteroviridae;
OC   Closterovirus.
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RN   [1]
RP   1-672
RX   PUBMED; 18074213.
RA   Cerni S., Ruscic J., Nolasco G., Gatin Z., Krajacic M., Skoric D.;
RT   "Stem pitting and seedling yellows symptoms of Citrus tristeza virus
RT   infection may be determined by minor sequence variants";
RL   Virus Genes 36(1):241-249(2008).
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RN   [2]
RP   1-672
RA   Cerni S., Ruscic J., Nolasco G., Gatin Z., Krajacic M., Skoric D.;
RT   ;
RL   Submitted (19-NOV-2007) to the EMBL/GenBank/DDBJ databases.
RL   Biology/Botany, University of Zagreb, Faculty of Science, Marulicev trg 9a,
RL   Zagreb 10000, Croatia
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FH   Key             Location/Qualifiers
FH
FT   source          1. .672
FT                   /organism="Citrus tristeza virus"
FT                   /specific_host="Citrus wilsonii"
FT                   /isolate="CwS3_F"
FT                   /mol_type="genomic RNA"
FT                   /country="Croatia"
FT                   /db_xref="taxon:12162"
FT   gene            1. .672
FT                   /gene="CP"
FT   misc_feature    1. .672
FT                   /gene="CP"
FT                   /note="nonfunctional coat protein due to mutation; p25"
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SQ   Sequence 672 BP; 192 A; 124 C; 176 G; 180 T; 0 other;

eu288082 Length: 672  02-MAR-2008  Type: N  Check: 1781  ..

       1  atggacgacg aaacaaagac attgaagaac aaaaacaagg agacgaaaga
      51  aggcgacgat gttgttgcag cagagtcttc tttcggttcc gtgaacttac
     101  acatcgatcc gactctgata gcgatgaacg atgtgcgtca gttgggaacc
     151  caacagaacg ccgcattgaa cagagacttg tttcttactc tgaaagggaa
     201  gtatcctaac ttgcctgaca aggataagga tttccacata gctatgatgt
     251  tatatcgttt agcggttaag agttcatcgt tgcaaagtga tgatgacacc
     301  acgggtataa catatactcg ggagggtatt gaagtggatt tgtctgacaa
     351  gctttggact gacgtcgtgt ttaactccaa gggtattggt aaccgtacta
     401  atgcccttcg agtctggggt aggactaacg atgcccttta tttagctttc
     451  tgtagacaga atcgcaattt gagttatggt ggacgtccgc tagatgcagg
     501  gattccggct ggataacatt acctatgtgc agatttcttg accggagctg
     551  gcttgactga tttagaatgt gctgtgtaca tacaagctaa ggaacaattg
     601  ttgaagaagc gaggggctga tgaagtcgta gttactaatg tctggcagct
     651  tgggaaattc aacacacgtt ga