Sequence of DPV Citrus tristeza virus
Citrus tristeza virus isolate I141-55 coat protein mRNA, complete cds.
ACC No: EU579356
Dated: 2009-01-13 | Length: 672 | CRC: 511188147
ID EU579356; SV 1; linear; mRNA; STD; VRL; 672 BP. XX AC EU579356; XX DT 13-JAN-2009 (Rel. 99, Created) DT 13-JAN-2009 (Rel. 99, Last updated, Version 1) XX DE Citrus tristeza virus isolate I141-55 coat protein mRNA, complete cds. XX KW . XX OS Citrus tristeza virus OC Viruses; ssRNA positive-strand viruses, no DNA stage; Closteroviridae; OC Closterovirus. XX RN [1] RP 1-672 RX PUBMED; 18992281. RA Nolasco G., Santos C., Silva G., Fonseca F.; RT "Development of an asymmetric PCR-ELISA typing method for citrus tristeza RT virus based on the coat protein gene"; RL J. Virol. Methods 155(2):97-108(2009). XX RN [2] RP 1-672 RA Astua J., Santos C., Nolasco G.; RT ; RL Submitted (19-MAR-2008) to the EMBL/GenBank/DDBJ databases. RL BioFIG, University of Algarve, Campus de Gambelas, Faro, Faro 8005-139, RL Portugal XX FH Key Location/Qualifiers FH FT source 1. .672 FT /organism="Citrus tristeza virus" FT /isolate="I141-55" FT /mol_type="mRNA" FT /country="Brazil" FT /db_xref="taxon:12162" FT CDS 1. .672 FT /codon_start=1 FT /product="coat protein" FT /protein_id="ACE77093.1" FT /translation="MDDETKKLKNKNKETKEGDDVVAAESSFSSVNLHIDPTLITMNDV FT RQLSTQQNAALNRDLFLTLKGKYPNLPDKDKDFHIAMMLYRLAVKSSSLQSDDDATGIT FT YTREGVEVDLSDKLWTDVVFNSKGIGNRTNALRVWGRTNDALYLAFCRQNRNLSYGGRP FT LDAGIPAGYHYLCADFLTGAGLTDLECAVYIQAKEQLLKKRGADDVVVTNVRQLGKFNT FT R" XX SQ Sequence 672 BP; 197 A; 124 C; 167 G; 184 T; 0 other; eu579356 Length: 672 13-JAN-2009 Type: N Check: 2988 .. 1 atggacgacg aaacaaagaa attgaagaac aaaaacaagg aaacaaaaga 51 aggcgacgat gttgttgctg ccgagtcttc tttcagttcc gtaaacttac 101 acatcgatcc gactttgata acgatgaacg atgtgcgtca attgagtacc 151 caacagaacg ctgctttgaa cagagactta ttccttactt tgaaagggaa 201 gtatcctaac ttacctgata aagataagga ctttcacata gctatgatgt 251 tgtatcgttt agcagttaag agttcatcat tacaaagcga tgacgacgcc 301 acgggtataa cgtacactcg ggagggtgtt gaagtggatt tgtctgacaa 351 actttggact gacgtcgtgt ttaactctaa gggtattggt aaccgtacta 401 acgcccttcg agtttggggt agaactaacg atgcccttta cttagctttt 451 tgcagacaga atcgcaattt gagttatggc ggacgtccgc tagacgcagg 501 gattccggcc gggtatcatt acttgtgtgc ggatttcttg actggggctg 551 gtttgactga tttagaatgt gctgtgtaca tacaagctaa agaacaatta 601 ttgaagaagc gaggggctga tgatgtcgta gttactaatg tcaggcagct 651 tgggaaattc aacacacgtt ga