Sequence of DPV Citrus tristeza virus
Citrus tristeza virus isolate BaraoB-6 coat protein mRNA, complete cds.
ACC No: EU579362
Dated: 2009-01-13 | Length: 672 | CRC: -1466561356
ID EU579362; SV 1; linear; mRNA; STD; VRL; 672 BP. XX AC EU579362; XX DT 13-JAN-2009 (Rel. 99, Created) DT 13-JAN-2009 (Rel. 99, Last updated, Version 1) XX DE Citrus tristeza virus isolate BaraoB-6 coat protein mRNA, complete cds. XX KW . XX OS Citrus tristeza virus OC Viruses; ssRNA positive-strand viruses, no DNA stage; Closteroviridae; OC Closterovirus. XX RN [1] RP 1-672 RX PUBMED; 18992281. RA Nolasco G., Santos C., Silva G., Fonseca F.; RT "Development of an asymmetric PCR-ELISA typing method for citrus tristeza RT virus based on the coat protein gene"; RL J. Virol. Methods 155(2):97-108(2009). XX RN [2] RP 1-672 RA Astua J., Santos C., Nolasco G.; RT ; RL Submitted (19-MAR-2008) to the EMBL/GenBank/DDBJ databases. RL BioFIG, University of Algarve, Campus de Gambelas, Faro, Faro 8005-139, RL Portugal XX FH Key Location/Qualifiers FH FT source 1. .672 FT /organism="Citrus tristeza virus" FT /isolate="BaraoB-6" FT /mol_type="mRNA" FT /country="Brazil" FT /db_xref="taxon:12162" FT CDS 1. .672 FT /codon_start=1 FT /product="coat protein" FT /protein_id="ACE77099.1" FT /translation="MDDETKKLKNKNKEAKEGDDVVAAESSFGSLNFHIDPTLIAMNDV FT RQLSTQQNAALNRDLFLTLKGKYPNLSDKDKDFHLAMMLYRLAVKSSSLQSDDDTTGIT FT YTREGVEVDLSDKLWTDVVFNSKGIGNRTNALRVWGRSNDALYLAFCRQNRNLSYGGRP FT LDAGIPAGYHYLCADFLTGAGLTDLECAVYIQAKEQLLKKRGADEIVVTNVRQLGKFNT FT R" XX SQ Sequence 672 BP; 193 A; 128 C; 173 G; 178 T; 0 other; eu579362 Length: 672 13-JAN-2009 Type: N Check: 878 .. 1 atggacgacg aaacaaagaa attgaagaac aaaaacaagg aagcgaaaga 51 aggcgacgat gttgttgcag cggagtcttc tttcggttcc ttaaacttcc 101 acatcgatcc gactctgata gcgatgaacg atgtgcgtca gttaagtacc 151 caacagaacg ccgctttgaa cagagatttg ttccttactt tgaaagggaa 201 gtatcctaat ttgtctgata aagacaaaga ctttcactta gctatgatgt 251 tgtatcgttt agcggttaag agttcatcat tgcaaagtga cgacgacacc 301 acgggcataa cgtacactcg ggagggcgtc gaagtggatt tgtctgacaa 351 actttggact gacgtcgtgt ttaattctaa gggtatcggt aaccgtacta 401 acgcccttcg agtctggggt agaagtaacg atgcccttta tttagcgttt 451 tgtagacaga atcgcaattt gagttatggc ggacgtccgc tagatgcagg 501 gattccggcc gggtatcatt acctgtgtgc agatttcttg accggagctg 551 gcttgactga tttagaatgt gctgtgtaca tacaagctaa agaacaattg 601 ttgaagaagc gaggggctga tgaaatcgta gttaccaatg tcaggcagct 651 tgggaaattc aacacacgtt ga