Sequence of DPV Citrus tristeza virus
Citrus tristeza virus isolate L1-3 coat protein mRNA, complete cds.
ACC No: EU579368
Dated: 2009-01-13 | Length: 672 | CRC: 2013800965
ID EU579368; SV 1; linear; mRNA; STD; VRL; 672 BP. XX AC EU579368; XX DT 13-JAN-2009 (Rel. 99, Created) DT 13-JAN-2009 (Rel. 99, Last updated, Version 1) XX DE Citrus tristeza virus isolate L1-3 coat protein mRNA, complete cds. XX KW . XX OS Citrus tristeza virus OC Viruses; ssRNA positive-strand viruses, no DNA stage; Closteroviridae; OC Closterovirus. XX RN [1] RP 1-672 RX PUBMED; 18992281. RA Nolasco G., Santos C., Silva G., Fonseca F.; RT "Development of an asymmetric PCR-ELISA typing method for citrus tristeza RT virus based on the coat protein gene"; RL J. Virol. Methods 155(2):97-108(2009). XX RN [2] RP 1-672 RA Batista L., Santos C., Nolasco G., Lopez D.; RT ; RL Submitted (19-MAR-2008) to the EMBL/GenBank/DDBJ databases. RL BioFIG, University of Algarve, Campus de Gambelas, Faro, Faro 8005-139, RL Portugal XX FH Key Location/Qualifiers FH FT source 1. .672 FT /organism="Citrus tristeza virus" FT /isolate="L1-3" FT /mol_type="mRNA" FT /country="Cuba" FT /db_xref="taxon:12162" FT CDS 1. .672 FT /codon_start=1 FT /product="coat protein" FT /protein_id="ACE77105.1" FT /translation="MDDETKKLKNKNKETKEXDNVVAAESSFGSVNLHIDPTLITMNDV FT RQLSTQQNAALNRDLFLALKGKYPNLPDKDKDFHIAMMLYRLAVKSSSLQSDDDTTGIT FT YTREGVEVDLSDKLWTDIVYNSKGIGNRTNALRVWGRTNDALYLAFCRQNRNLSYGGRP FT LDAGIPAGYHYLCADFMTGAGLTDLECAVYIQAKEQLLKKRGADEVVVTNVRQLGKFNT FT R" XX SQ Sequence 672 BP; 200 A; 122 C; 167 G; 182 T; 1 other; eu579368 Length: 672 13-JAN-2009 Type: N Check: 3291 .. 1 atggacgacg aaacaaagaa attgaagaac aaaaacaagg aaacgaaaga 51 agrcgacaat gttgttgctg ctgagtcttc tttcggttcc gtaaacttac 101 acatcgatcc gactctgata acgatgaacg atgtgcgtca gttgagtact 151 caacagaatg ctgctttgaa cagggactta tttcttgctc tgaaagggaa 201 gtatcctaac ttgcctgaca aagataagga ctttcacata gctatgatgt 251 tataccgttt agcggttaag agttcatcat tgcaaagtga tgatgacacc 301 acgggcataa cgtacactcg ggagggtgtt gaagtagatt tgtctgacaa 351 actttggacc gacatcgtgt ataattctaa gggtattggt aaccgaacta 401 acgcccttcg agtctggggt agaactaacg atgctcttta cttagccttt 451 tgtagacaga accgcaattt gagttatggc ggacgtccgc tagatgcagg 501 gattccggct gggtatcatt atttgtgtgc agatttcatg accggagctg 551 gcttgactga tttagaatgt gctgtgtaca tacaagctaa agaacaattg 601 ttgaaaaaac gaggggctga tgaggttgta gttactaatg tcaggcagct 651 tgggaaattc aacacacgtt ga