Sequence of DPV Citrus tristeza virus
Citrus tristeza virus isolate C320-5-21 coat protein mRNA, complete cds.
ACC No: EU579380
Dated: 2009-01-13 | Length: 672 | CRC: -1915233251
ID EU579380; SV 1; linear; mRNA; STD; VRL; 672 BP. XX AC EU579380; XX DT 13-JAN-2009 (Rel. 99, Created) DT 13-JAN-2009 (Rel. 99, Last updated, Version 1) XX DE Citrus tristeza virus isolate C320-5-21 coat protein mRNA, complete cds. XX KW . XX OS Citrus tristeza virus OC Viruses; ssRNA positive-strand viruses, no DNA stage; Closteroviridae; OC Closterovirus. XX RN [1] RP 1-672 RX PUBMED; 18992281. RA Nolasco G., Santos C., Silva G., Fonseca F.; RT "Development of an asymmetric PCR-ELISA typing method for citrus tristeza RT virus based on the coat protein gene"; RL J. Virol. Methods 155(2):97-108(2009). XX RN [2] RP 1-672 RA la Plata I., Santos C., Nolasco G.; RT ; RL Submitted (19-MAR-2008) to the EMBL/GenBank/DDBJ databases. RL BioFIG, University of Algarve, Campus de Gambelas, Faro, Faro 8005-139, RL Portugal XX FH Key Location/Qualifiers FH FT source 1. .672 FT /organism="Citrus tristeza virus" FT /isolate="C320-5-21" FT /mol_type="mRNA" FT /country="Argentina" FT /db_xref="taxon:12162" FT CDS 1. .672 FT /codon_start=1 FT /product="coat protein" FT /protein_id="ACE77117.1" FT /translation="MDDETKKLKNKNKETKEGDDVVAAESSFGSLNLHIDPTLIAMNDV FT RQLGTQQNAALNRDLFLTLKGKYPNLPDKDKDFHIAMMLYRLAVKSSSLQSDDDTTGVT FT YTREGVEVELSDKLWTDVVFNSKGIGNRTNALRVWGRTNDALYLAFCRQNRNLSYGGRP FT LDAGIPAGYHYLCADFLTGASLTDLECAVYLQAKEQLLKKRGADEVVVTNVRQLGKFNT FT R" XX SQ Sequence 672 BP; 200 A; 123 C; 168 G; 181 T; 0 other; eu579380 Length: 672 13-JAN-2009 Type: N Check: 3213 .. 1 atggacgacg aaacaaagaa attgaagaac aaaaacaagg aaacgaaaga 51 aggcgacgat gttgttgcag ctgagtcttc tttcggttcg ttaaacttac 101 acatcgatcc gactctgata gcgatgaacg atgtgcgtca gttgggtacc 151 caacagaatg ctgctttgaa tagagattta tttcttacct tgaaagggaa 201 gtatcccaac ttacctgaca aagataaaga ctttcacata gctatgatgt 251 tatatcgttt agcagttaag agttcatcat tacaaagcga cgatgatacc 301 acgggtgtga cgtacactcg ggaaggtgtt gaagtggagt tgtctgacaa 351 actttggaca gacgtcgtgt ttaactctaa gggtattggt aaccgtacta 401 acgcccttcg agtctggggt agaactaacg atgcccttta tttggctttt 451 tgtagacaga accgcaactt gagttatggt ggacgtccgt tagatgcagg 501 aattccagcc gggtatcact acctgtgtgc agatttcttg accggagcta 551 gcttgactga tttagaatgt gcagtgtact tacaagctaa agagcaatta 601 ttaaagaagc gaggggctga tgaggtcgta gttactaatg tcaggcagct 651 tgggaaattc aacacacgtt ga