Sequence of DPV Citrus tristeza virus
Citrus tristeza virus isolate S78-44 coat protein mRNA, complete cds.
ACC No: EU579402
Dated: 2009-01-13 | Length: 672 | CRC: 781932374
ID EU579402; SV 1; linear; mRNA; STD; VRL; 672 BP. XX AC EU579402; XX DT 13-JAN-2009 (Rel. 99, Created) DT 13-JAN-2009 (Rel. 99, Last updated, Version 1) XX DE Citrus tristeza virus isolate S78-44 coat protein mRNA, complete cds. XX KW . XX OS Citrus tristeza virus OC Viruses; ssRNA positive-strand viruses, no DNA stage; Closteroviridae; OC Closterovirus. XX RN [1] RP 1-672 RX PUBMED; 18992281. RA Nolasco G., Santos C., Silva G., Fonseca F.; RT "Development of an asymmetric PCR-ELISA typing method for citrus tristeza RT virus based on the coat protein gene"; RL J. Virol. Methods 155(2):97-108(2009). XX RN [2] RP 1-672 RA Myers L., Santos C., Nolasco G.; RT ; RL Submitted (19-MAR-2008) to the EMBL/GenBank/DDBJ databases. RL BioFIG, University of Algarve, Campus de Gambelas, Faro, Faro 8005-139, RL Portugal XX FH Key Location/Qualifiers FH FT source 1. .672 FT /organism="Citrus tristeza virus" FT /isolate="S78-44" FT /mol_type="mRNA" FT /country="Jamaica" FT /db_xref="taxon:12162" FT CDS 1. .672 FT /codon_start=1 FT /product="coat protein" FT /protein_id="ACE77139.1" FT /translation="MDDETKKLKNKNKETEEGDNVVAAESSFGSVNLHIDPTLIAMNDV FT RQLGTQQNAALNRDLFLTLKGKYPNLPDKDKDFHIAMMLYRLAVKSSSLQSDDDTTGVT FT YTRDGVEVELSDKLWTDIVFNSKGIGNRTNALRVWGRTNDALYLAFCRQNRNLSYGGRP FT LDAGIPAGYHYLCADFLTGAGLTDLECAVYIQAKEQLLKKRGADEVVVTNVRQLGKFNT FT R" XX SQ Sequence 672 BP; 199 A; 122 C; 169 G; 182 T; 0 other; eu579402 Length: 672 13-JAN-2009 Type: N Check: 3744 .. 1 atggacgacg aaacaaagaa attgaagaac aaaaacaagg aaacggaaga 51 aggcgacaat gttgttgcgg ctgagtcttc tttcggttcc gtaaacttac 101 acatcgatcc gactttgata gcgatgaacg atgtacgtca gttgggtacc 151 caacagaatg ctgctttgaa tagagatttg tttcttacct tgaaagggaa 201 gtatcctaac ttacctgaca aagataaaga ttttcacata gctatgatgt 251 tgtatcgttt agcagttaag agttcatcat tacaaagcga cgatgatacc 301 acgggtgtga cgtacactcg ggacggtgtt gaagtggaat tgtctgacaa 351 actttggaca gacatcgtgt ttaactctaa gggtattggt aaccgtacta 401 acgcccttcg agtctggggt agaactaacg atgcccttta tttggctttt 451 tgtagacaga accgcaactt gagttatggt ggacgtccgt tagatgcagg 501 aattccagcc gggtatcact acctgtgtgc agatttcttg accggagccg 551 gcttgactga tttagaatgt gcagtgtaca tacaagctaa agagcaatta 601 ttaaagaagc gaggggctga tgaggttgta gttactaatg tcaggcagct 651 tgggaaattc aacacacgtt ga