Sequence of DPV Citrus tristeza virus
Citrus tristeza virus isolate K1-76 coat protein mRNA, complete cds.
ACC No: EU579411
Dated: 2009-01-13 | Length: 672 | CRC: 1011745633
ID EU579411; SV 1; linear; mRNA; STD; VRL; 672 BP. XX AC EU579411; XX DT 13-JAN-2009 (Rel. 99, Created) DT 13-JAN-2009 (Rel. 99, Last updated, Version 1) XX DE Citrus tristeza virus isolate K1-76 coat protein mRNA, complete cds. XX KW . XX OS Citrus tristeza virus OC Viruses; ssRNA positive-strand viruses, no DNA stage; Closteroviridae; OC Closterovirus. XX RN [1] RP 1-672 RX PUBMED; 18992281. RA Nolasco G., Santos C., Silva G., Fonseca F.; RT "Development of an asymmetric PCR-ELISA typing method for citrus tristeza RT virus based on the coat protein gene"; RL J. Virol. Methods 155(2):97-108(2009). XX RN [2] RP 1-672 RA Amin H., Santos C., Nolasco G.; RT ; RL Submitted (19-MAR-2008) to the EMBL/GenBank/DDBJ databases. RL BioFIG, University of Algarve, Campus de Gambelas, Faro, Faro 8005-139, RL Portugal XX FH Key Location/Qualifiers FH FT source 1. .672 FT /organism="Citrus tristeza virus" FT /isolate="K1-76" FT /mol_type="mRNA" FT /country="Tunisia" FT /db_xref="taxon:12162" FT CDS 1. .672 FT /codon_start=1 FT /product="coat protein" FT /protein_id="ACE77148.1" FT /translation="MDDETKKLKNKNKETKEGDDVVAAESSFGSANLHIDPTLITMNDV FT RQLGTQQNAALNRDLFLTLKGKYPSLSDKDKDFHIAMMLYRLAVKSSSLQSDDDTTGIT FT YTREGVEVDLSDKLWTDVVFNSKGIGNRTNALRVWGRTNDALYLAFCRQNRNLSYGGRP FT LDAGIPAGYHYLCADFLTGAGLTDLECAVYIQAKEQLLKKRGAGEVVVTNVRQLGKFNT FT R" XX SQ Sequence 672 BP; 191 A; 121 C; 177 G; 183 T; 0 other; eu579411 Length: 672 13-JAN-2009 Type: N Check: 5092 .. 1 atggacgacg aaacaaagaa attgaagaac aaaaacaagg agacgaaaga 51 aggcgacgat gttgttgcag cagagtcttc tttcggttcc gcgaatttac 101 acatcgatcc gactctgata acgatgaacg atgtgcgtca gttgggaacc 151 caacagaacg ctgctttgaa cagagatttg tttcttactc tgaaagggaa 201 gtatcctagc ttgtctgaca aggataagga cttccacata gctatgatgt 251 tatatcgttt agcggttaag agttcatcgt tgcaaagtga tgatgacacc 301 acgggcataa catatactcg ggagggtgtt gaagtggatt tgtctgacaa 351 gctttggact gacgtcgtgt ttaactctaa gggtattggt aaccgtacta 401 atgcccttcg agtctggggt aggactaacg atgcccttta tttagctttc 451 tgtagacaga atcgcaattt gagttatggt ggacgtccgc tagatgcagg 501 gattccggct gggtatcatt acctatgtgc agatttcttg accggagctg 551 gcttgactga tttagaatgt gctgtgtaca tacaagctaa ggaacaatta 601 ttaaagaagc gaggggctgg tgaagtcgta gttactaatg tcaggcagct 651 tgggaaattc aacacacgtt ga