Sequence of DPV Citrus tristeza virus
Citrus tristeza virus isolate 435-6 coat protein mRNA, complete cds.
ACC No: EU579413
Dated: 2009-01-13 | Length: 672 | CRC: 171138813
ID EU579413; SV 1; linear; mRNA; STD; VRL; 672 BP. XX AC EU579413; XX DT 13-JAN-2009 (Rel. 99, Created) DT 13-JAN-2009 (Rel. 99, Last updated, Version 1) XX DE Citrus tristeza virus isolate 435-6 coat protein mRNA, complete cds. XX KW . XX OS Citrus tristeza virus OC Viruses; ssRNA positive-strand viruses, no DNA stage; Closteroviridae; OC Closterovirus. XX RN [1] RP 1-672 RX PUBMED; 18992281. RA Nolasco G., Santos C., Silva G., Fonseca F.; RT "Development of an asymmetric PCR-ELISA typing method for citrus tristeza RT virus based on the coat protein gene"; RL J. Virol. Methods 155(2):97-108(2009). XX RN [2] RP 1-672 RA Cerni S., Santos C., Martins V., Nolasco G.; RT ; RL Submitted (19-MAR-2008) to the EMBL/GenBank/DDBJ databases. RL BioFIG, University of Algarve, Campus de Gambelas, Faro, Faro 8005-139, RL Portugal XX FH Key Location/Qualifiers FH FT source 1. .672 FT /organism="Citrus tristeza virus" FT /isolate="435-6" FT /mol_type="mRNA" FT /country="Croatia" FT /db_xref="taxon:12162" FT CDS 1. .672 FT /codon_start=1 FT /product="coat protein" FT /protein_id="ACE77150.1" FT /translation="MDDETKKLKNKNKETKEGDDVVAAESSFGSLNLHIDPTLIAMNDV FT RQLGTQQNAALNRDLLLTLKGKHPNLPDKDKDLHIAMMLYRLAVKSSSLQSDDDTTGIT FT YTREGVEVDLPDKLWTDVVFNSKGIGNRTNALRVWGRTNDALYLAFCRQNRNLSYGGRP FT LDAGIPAGYHYLCADFLTGAGLTDLECAVYIQAKEQLLKKRGADEVVVTNVRQLGKFNT FT R" XX SQ Sequence 672 BP; 199 A; 133 C; 165 G; 175 T; 0 other; eu579413 Length: 672 13-JAN-2009 Type: N Check: 8866 .. 1 atggacgacg aaacaaagaa attgaagaac aaaaataagg aaacgaaaga 51 aggcgacgac gttgttgccg ctgagtcttc tttcggttcc ttaaacttac 101 acatcgatcc aactctgata gcgatgaatg acgtgcgtca gttgggtacc 151 caacagaacg ctgctttaaa cagagactta cttcttactt tgaaagggaa 201 gcatcctaac ttacctgaca aagataagga ccttcacata gctatgatgt 251 tgtatcgttt agcagttaaa agctcatcat tacaaagcga tgacgacact 301 acgggtataa cgtacactcg ggagggtgtt gaagtggatt tgcctgacaa 351 actttggact gacgtcgtgt ttaactccaa gggtattggc aaccgtacta 401 acgcccttcg agtttggggt agaactaacg atgcccttta cttagctttc 451 tgtagacaga atcgcaattt gagttatggc ggacgtccgt tagatgcagg 501 gattccggcc gggtatcatt acctgtgtgc agatttcttg accggagctg 551 gcttgactga tttagaatgt gctgtgtaca tacaagctaa agaacaattg 601 ttgaagaagc gaggagctga tgaagtcgta gttaccaatg tcaggcagct 651 tgggaaattc aacacacgtt ga