Sequence of DPV Citrus tristeza virus
Citrus tristeza virus isolate 443-13 coat protein mRNA, complete cds.
ACC No: EU579420
Dated: 2009-01-13 | Length: 672 | CRC: -863383633
ID EU579420; SV 1; linear; mRNA; STD; VRL; 672 BP. XX AC EU579420; XX DT 13-JAN-2009 (Rel. 99, Created) DT 13-JAN-2009 (Rel. 99, Last updated, Version 1) XX DE Citrus tristeza virus isolate 443-13 coat protein mRNA, complete cds. XX KW . XX OS Citrus tristeza virus OC Viruses; ssRNA positive-strand viruses, no DNA stage; Closteroviridae; OC Closterovirus. XX RN [1] RP 1-672 RX PUBMED; 18992281. RA Nolasco G., Santos C., Silva G., Fonseca F.; RT "Development of an asymmetric PCR-ELISA typing method for citrus tristeza RT virus based on the coat protein gene"; RL J. Virol. Methods 155(2):97-108(2009). XX RN [2] RP 1-672 RA Cerni S., Santos C., Martins V., Nolasco G.; RT ; RL Submitted (19-MAR-2008) to the EMBL/GenBank/DDBJ databases. RL BioFIG, University of Algarve, Campus de Gambelas, Faro, Faro 8005-139, RL Portugal XX FH Key Location/Qualifiers FH FT source 1. .672 FT /organism="Citrus tristeza virus" FT /isolate="443-13" FT /mol_type="mRNA" FT /country="Croatia" FT /db_xref="taxon:12162" FT CDS 1. .672 FT /codon_start=1 FT /product="coat protein" FT /protein_id="ACE77157.1" FT /translation="MDDETKKLKNRNKETKEGDDVVAAESSFGSVNLHIDPTQIAMNDV FT RQLGTQQNAALNRDLFLTLKGKYPNLPDKDKDFHIAMMLYRLAVKSSSLQSDDDTTGIT FT YTREGIEVDLSDKLWTDVVFNSKGIGNRTNALRVWGRTNDALYLAFCRQNRNLSYGGRP FT LDAGIPAGYHYLCADFLTGAGLTDLECAVYIQAKEQLSKKRGADEVVVTNVRQLGKFNT FT R" XX SQ Sequence 672 BP; 193 A; 124 C; 177 G; 178 T; 0 other; eu579420 Length: 672 13-JAN-2009 Type: N Check: 1104 .. 1 atggacgacg aaacaaagaa attgaagaac agaaacaagg agacgaaaga 51 aggcgacgat gttgttgcag cagagtcttc tttcggttcc gtgaacttac 101 acatcgatcc gactcagata gcgatgaacg atgtgcgtca gttgggaacc 151 caacagaacg ccgcattgaa cagagacttg tttcttactc tgaaagggaa 201 gtatcctaac ttgcctgaca aggataagga tttccacata gctatgatgt 251 tatatcgttt agcggttaag agttcatcgt tgcaaagtga tgatgacacc 301 acgggtataa catatactcg ggagggtatt gaagtggatt tgtctgacaa 351 gctttggact gacgtcgtgt ttaactccaa gggtattggt aaccgtacta 401 atgcccttcg agtctggggt aggactaacg atgcccttta tttagctttc 451 tgtagacaga atcgcaattt gagttatggt ggacgtccgc tagatgcagg 501 gattccggct ggatatcatt acctatgtgc agatttcttg accggagctg 551 gcttgactga tttagaatgt gctgtgtaca tacaagctaa ggaacaattg 601 tcgaagaagc gaggggctga tgaagtcgta gttactaatg tcaggcagct 651 tgggaaattc aacacacgtt ga