Sequence of DPV Citrus tristeza virus
Citrus tristeza virus isolate 398-3 coat protein mRNA, complete cds.
ACC No: EU579433
Dated: 2009-01-13 | Length: 672 | CRC: -698027717
ID EU579433; SV 1; linear; mRNA; STD; VRL; 672 BP. XX AC EU579433; XX DT 13-JAN-2009 (Rel. 99, Created) DT 13-JAN-2009 (Rel. 99, Last updated, Version 1) XX DE Citrus tristeza virus isolate 398-3 coat protein mRNA, complete cds. XX KW . XX OS Citrus tristeza virus OC Viruses; ssRNA positive-strand viruses, no DNA stage; Closteroviridae; OC Closterovirus. XX RN [1] RP 1-672 RX PUBMED; 18992281. RA Nolasco G., Santos C., Silva G., Fonseca F.; RT "Development of an asymmetric PCR-ELISA typing method for citrus tristeza RT virus based on the coat protein gene"; RL J. Virol. Methods 155(2):97-108(2009). XX RN [2] RP 1-672 RA Zemzami M., Nolasco G.; RT ; RL Submitted (19-MAR-2008) to the EMBL/GenBank/DDBJ databases. RL BioFIG, University of Algarve, Campus de Gambelas, Faro, Faro 8005-139, RL Portugal XX FH Key Location/Qualifiers FH FT source 1. .672 FT /organism="Citrus tristeza virus" FT /isolate="398-3" FT /mol_type="mRNA" FT /country="Morocco" FT /db_xref="taxon:12162" FT CDS 1. .672 FT /codon_start=1 FT /product="coat protein" FT /protein_id="ACE77170.1" FT /translation="MDDETKKLKNKNKETKEGDDVVAAESSFGSLNLHIDPTLITMNDV FT RQLSTQQDAALNRDLFLTLKGKYPNLPDKDKDFHIAMMLYRLAVKSSSLQSDDDTTGIT FT YTREGVEVDLSDKLWTDVVFNSKGIGNRTNALRVWGRTNDALYLAFCRQNRNLSYGGRP FT LDAGIPAGYHYLCADFLTGAGLTDLECAVYIQAKEQLLKKRGADEVVVTNVRQLGKFNT FT R" XX SQ Sequence 672 BP; 195 A; 130 C; 167 G; 180 T; 0 other; eu579433 Length: 672 13-JAN-2009 Type: N Check: 1632 .. 1 atggacgacg aaacaaagaa attgaagaac aaaaacaagg aaacgaaaga 51 aggcgacgat gttgttgctg ctgagtcttc tttcggttcc ttaaacttac 101 acatcgatcc aactctgata acgatgaatg acgtgcgtca gttgagtacc 151 caacaggacg ctgctttaaa cagagacttg tttcttactt tgaaagggaa 201 gtatcctaac ttacctgaca aagataagga ctttcacata gctatgatgt 251 tgtatcgttt agcagttaag agttcatcat tacaaagcga tgacgacact 301 acgggcataa cgtacactcg ggagggtgtt gaagtggatt tgtccgacaa 351 actttggact gacgtcgtgt ttaactccaa gggtattggc aaccgtacta 401 acgcccttcg agtttggggt agaactaacg atgcccttta cttagctttt 451 tgtagacaga atcgcaattt gagttatggc ggacgtccgc tagatgctgg 501 gattccggcc gggtaccatt acctgtgtgc tgatttcttg accggagctg 551 gcttgactga tttagaatgt gctgtgtaca tacaagctaa agaacaattg 601 ttgaagaagc gaggggctga tgaagtcgta gttaccaatg tcaggcagct 651 tgggaaattc aacacacgtt ga