Sequence of DPV Maize streak virus
Maize streak virus isolate MSV-B1_Za-RawK-g30-2006, complete genome.
ACC No: EU628600
Dated: 2008-09-30 | Length: 2683 | CRC: -920098956
ID EU628600; SV 1; circular; genomic DNA; STD; VRL; 2683 BP. XX AC EU628600; XX DT 30-SEP-2008 (Rel. 97, Created) DT 30-SEP-2008 (Rel. 97, Last updated, Version 1) XX DE Maize streak virus isolate MSV-B1_Za-RawK-g30-2006, complete genome. XX KW . XX OS Maize streak virus OC Viruses; ssDNA viruses; Geminiviridae; Mastrevirus. XX RN [1] RP 1-2683 RX PUBMED; 18753214. RA Varsani A., Shepherd D.N., Monjane A.L., Owor B.E., Erdmann J.B., RA Rybicki E.P., Peterschmitt M., Briddon R.W., Markham P.G., Oluwafemi S., RA Windram O.P., Lefeuvre P., Lett J.M., Martin D.P.; RT "Recombination, decreased host specificity and increased mobility may have RT driven the emergence of maize streak virus as an agricultural pathogen"; RL J. Gen. Virol. 89(PT 9):2063-2074(2008). XX RN [2] RP 1-2683 RA Varsani A., Shepherd D.N., Monjane A.L., Owor B.E., Erdmann J.B., RA Rybicki E.P., Piterschmitt M., Briddon R.W., Markham P.G., Oluwafemi S., RA Windram O.P., Lefeurve P., Lett J.-M.; RT ; RL Submitted (10-APR-2008) to the EMBL/GenBank/DDBJ databases. RL Electron Microscope Unit, University of Cape Town, RW James Bld, RL Rondebosch, Cape Town, WP 7701, South Africa XX FH Key Location/Qualifiers FH FT source 1. .2683 FT /organism="Maize streak virus" FT /isolate="MSV-B1_Za-RawK-g30-2006" FT /mol_type="genomic DNA" FT /country="South Africa" FT /lat_lon="33.87 S 19.31 E" FT /collection_date="2006" FT /db_xref="taxon:10821" FT CDS 157. .462 FT /codon_start=1 FT /product="movement protein" FT /protein_id="ACF40439.1" FT /translation="MDPQNSFLLQPRVPTAAPTSGGVSWSRVGEVAILSFVGLICFYLL FT YLWVLRDLILVLKARQGRSTEELIFGIQAVDRSNPIPNTQTPPSQVNPGPFVPGTG" FT CDS 473. .1207 FT /codon_start=1 FT /product="coat protein" FT /protein_id="ACF40440.1" FT /translation="MSTSKRKRGDDANWNKRTTKKKPSSAGLKKAGSKAERPSLQIQTL FT QHAGSTMITVPSGGVCDLINTYARGSDEGNRHTSETLTYKIAVDYHFVADSQACKYSNT FT GTGVMWLVYDTTPGGQAPTPQTIFAYPDTLKAWPATWKVSRELCHRFVVKRRWLFNMET FT DGRIGSDIPPSNASWKPCKRNIYFHKFTSGLGVRTQWKNVTDGGVGAIQRGALYMVIAP FT GNGLTFTAHGQTRLYFKSVGNQ" FT CDS complement(1711. .2529) FT /codon_start=1 FT /product="RepA" FT /protein_id="ACF40441.1" FT /translation="MASSSSNRQFSHRNVNTFLTYPHCPENPEIVCQMIWELVGRWTPK FT YIICAQEAHKDGDMHLHALLQTEKPVRITDSRFFDIEGFHPNIQSAKSVNKVRDYILKE FT PLAVFERGTFIPRKSSFQGNPSKGNSEKKPSKDEIMREIISHSTSKLEYLSMIRKEFPY FT DWATKLQYFEYSANKLFPEIQEEFISPHPPSSPDLLCNESIKDWLQPNIFQVSPESYML FT LQPTCYTLEDAISDLEWMEKLSSQQMKEQESRASTSSVQQELGNLLGPEA" XX SQ Sequence 2683 BP; 700 A; 618 C; 664 G; 701 T; 0 other; eu628600 Length: 2683 30-SEP-2008 Type: N Check: 6272 .. 1 taatattacc gcgccttctt tttctgcgag ggcccgtagg gaccgagcga 51 tttgatttaa agttcggttc tgctttgtct gatttatcta aagcagccca 101 atctaaagaa accggtcccc tgcgactata aattgtttca caagtgcgat 151 tcatttatgg atccacagaa ctcctttctt ctacagccgc gggtacccac 201 agcagctccg acatccggag gagtgtcgtg gagtcgcgtc ggcgaggtag 251 ctattttgag ctttgttgga ttgatttgct tttacctgct ttacctttgg 301 gtgctgagag atcttatctt agttctgaag gctcgacaag gcagatccac 351 ggaggagctg atatttggaa tacaagctgt ggataggagc aaccctatcc 401 ctaatacaca gacaccacca agtcaggtga atcccgggcc gtttgttcca 451 ggcacgggat aagcaatcag ccatgtccac gtccaagagg aagcggggag 501 atgatgcgaa ctggaataag cggacgacta agaagaagcc atcttcagct 551 ggtctgaaga aggctggaag caaggccgaa aggccatccc ttcagatcca 601 gacactccag catgctgggt ccaccatgat aacagtcccc tccggaggag 651 tatgtgatct catcaacacc tatgcccgag gatccgacga gggcaaccgc 701 cacaccagcg agactctgac gtacaagatt gccgtcgact accacttcgt 751 tgcagactcg caagcctgca agtattctaa caccgggacc ggtgtgatgt 801 ggctggtgta cgacaccact cccggcggac aagcgccgac cccacaaacg 851 atatttgcat atccggacac gctgaaagct tggccggcaa catggaaagt 901 gagccgggag ctgtgtcatc gcttcgtggt gaaacggcga tggttgttca 951 acatggagac cgacggtcga attggttcgg acatccctcc ttcgaatgca 1001 agttggaagc cgtgcaagcg caacatctac ttccacaagt tcacgagtgg 1051 gttgggagtg agaacgcagt ggaagaatgt aacggacgga ggagttggtg 1101 cgatacagag aggagctctg tacatggtca ttgcccctgg caatggcctt 1151 acatttactg cccatgggca gacccgtctg tactttaaga gtgtcggcaa 1201 ccagtaatga ataaaaactc cgttttatta tatctgatga atgctgaaag 1251 cttacattaa tatgtcgtgt gatggcacga aaaacacact ggaacgcagc 1301 cccgggctaa agaccgggtc tcaagagacc ctgcgataca aaacatcgaa 1351 aaaacaagat ctatatgaat tacacttcct ccgtaggagg aagcacaggg 1401 ggagaatacc acttctcccc cggcgacatt ttataaatca tgcagtttgc 1451 ctcgaaatac tccagctgcc ctggagtcat ttcattcatc cagtcttcat 1501 cccagttggc gaggatgatt gtaggcttag acttcatctg aactttcttc 1551 ttcttgccat attttggatt tacaacgaac tctttctgac agccaactaa 1601 ctgtttccaa caaggacaga atttaaatgg aatatcatct acgatgttgt 1651 agattgcgtc ttcgttgtaa gaagaccaat caacattatt ttgccaataa 1701 ttatgaagcc ctaagcttct ggcccaagta gatttcccag ttcttgttgg 1751 accgacgatg tagaggctct gctttcttgt tccttcatct gttggctgga 1801 taatttttcc atccattcaa ggtcagagat agcatcttcg agggtgtaac 1851 aggtaggttg aagaagcata tatgattcgg gactaacctg aaagatgtta 1901 ggctggagcc aatctttgat tgactcatta caaagaagat caggtgaaga 1951 gggtggatga ggactgatga actcttcctg aatctcaggg aacaatttat 2001 ttgcagagta ttcaaaatac tgcaattttg tggcccagtc ataggggaat 2051 tctttacgaa tcatagagag gtactctagc tttgaagtgg agtgtgaaat 2101 aatctctctc attatttcat ctttggaagg tttcttttca gaatttccct 2151 tggaaggatt tccttggaag cttgacttcc taggaatgaa agtacctctc 2201 tcaaacacag ccagaggttc cttgagaatg taatccctga ccttgtttac 2251 tgattttgca ctctgaatgt ttgggtggaa cccttcgata tcaaagaacc 2301 ttgagtcagt gattcttacc ggtttttctg tctggagtaa tgcatgtaaa 2351 tgcatatctc cgtctttgtg tgcctcttgg gcacatatga tatacttcgg 2401 ggtccaacga ccaacgagct cccaaatcat ctgacagacg atttctggat 2451 tttctggaca gtgtggatat gttaggaacg tgttaacgtt cctgtgtgag 2501 aactgacggt tggatgagga ggaggccata tcggacgact ccgagcagct 2551 tgcgggatgg caggatggga gctcgaaact ctatatcaac cggcttgcgc 2601 cttcgaaatc cgccgctccc ccttttatag tggttgttaa tgggccggac 2651 cgggccggcc cagcaggaaa agaaggcgcg caa