Sequence of DPV Maize streak virus
Maize streak virus isolate MSV-G_Ng-EleA-g227-2007, complete genome.
ACC No: EU628635
Dated: 2008-09-30 | Length: 2688 | CRC: 1811359684
ID EU628635; SV 1; circular; genomic DNA; STD; VRL; 2688 BP. XX AC EU628635; XX DT 30-SEP-2008 (Rel. 97, Created) DT 30-SEP-2008 (Rel. 97, Last updated, Version 1) XX DE Maize streak virus isolate MSV-G_Ng-EleA-g227-2007, complete genome. XX KW . XX OS Maize streak virus OC Viruses; ssDNA viruses; Geminiviridae; Mastrevirus. XX RN [1] RP 1-2688 RX PUBMED; 18753214. RA Varsani A., Shepherd D.N., Monjane A.L., Owor B.E., Erdmann J.B., RA Rybicki E.P., Peterschmitt M., Briddon R.W., Markham P.G., Oluwafemi S., RA Windram O.P., Lefeuvre P., Lett J.M., Martin D.P.; RT "Recombination, decreased host specificity and increased mobility may have RT driven the emergence of maize streak virus as an agricultural pathogen"; RL J. Gen. Virol. 89(PT 9):2063-2074(2008). XX RN [2] RP 1-2688 RA Varsani A., Shepherd D.N., Monjane A.L., Owor B.E., Erdmann J.B., RA Rybicki E.P., Piterschmitt M., Briddon R.W., Markham P.G., Oluwafemi S., RA Windram O.P., Lefeurve P., Lett J.-M.; RT ; RL Submitted (10-APR-2008) to the EMBL/GenBank/DDBJ databases. RL Electron Microscope Unit, University of Cape Town, RW James Bld, RL Rondebosch, Cape Town, WP 7701, South Africa XX FH Key Location/Qualifiers FH FT source 1. .2688 FT /organism="Maize streak virus" FT /specific_host="Urochloa lata" FT /isolate="MSV-G_Ng-EleA-g227-2007" FT /mol_type="genomic DNA" FT /country="Nigeria" FT /lat_lon="7.85 N 3.94 E" FT /collection_date="2007" FT /db_xref="taxon:10821" FT CDS 157. .465 FT /codon_start=1 FT /product="movement protein" FT /protein_id="ACF40544.1" FT /translation="MDPQNSFLLQPRVPTATPSQTGGVPWSHVGEVAILSFVGLICLYL FT LYLWVLRDLILVLKARQGRSTEELVFGEQGVDRREPIPNRSASAGPVNPGPFVPGSG" FT CDS 476. .1210 FT /codon_start=1 FT /product="coat protein" FT /protein_id="ACF40545.1" FT /translation="MSTSKRKRGDDANWKKGTAKKKTSAAGLKKSVSKADRPSLQIQTL FT LHAGTTMITVPSGGICDLISTYARGSDEGNRHTSETLTYKMSLDYHFVADAAACKYSNI FT GTGVVWLVYDTTPGGQAPTTKQIFAYNDSLAAWPTTWKVSREMCHRFVVKRRWLFTMET FT NGRIGSDMPPSNAIWNPCKRSINFHKFTSGLGVRTMWKNVTDGGVGSIQRGALYMCIAP FT GNGLTFTAHGQTRLYFKSVGNQ" FT CDS complement(1716. .2534) FT /codon_start=1 FT /product="RepA" FT /protein_id="ACF40546.1" FT /translation="MASSSSNRQFSHRNANTFLTYPQCPENPEIVCQMIWELVGHWNPK FT YIICAREAHRDGNLHLHALVQTEKPVRTTDPRFFDIKGFHPNIQSAKSVNKVRDYILKE FT PLALFERGTFIPRKSPFLGKSDSEGSSKKPTKDEIMREIISHSTNKQEYLSMIQKEFPY FT DWATKLQYLEYSAKKLFPEIQEEFIDPHPPSSPDLLCSESIKDWLQPNIFQVSREAYML FT LQPTCYSVQDAISDLQWMDNLSSQQMKDQESRASTSSVQQELENLLGPEA" XX SQ Sequence 2688 BP; 673 A; 617 C; 679 G; 719 T; 0 other; eu628635 Length: 2688 30-SEP-2008 Type: N Check: 9724 .. 1 taatattacc gcgccttctt ttcctgcgag ggcccgcaag ggcccgagcg 51 atttgattta aagtttagat ctgctttgtt tgatttatct aaagcagtcc 101 aatctaaaga aaccggtccc ggtcactata aattgcctaa caagtgcgat 151 tcattcatgg atccacagaa ctcctttctt ctacagccgc gggtacccac 201 agcgactcct tcgcagacag gaggagtgcc gtggagtcac gttggcgagg 251 tagctatttt gagctttgtt ggtttgattt gcctttacct gctttacctt 301 tgggtgctga gagatcttat cttagttctg aaggctcgac aagggagatc 351 cacggaggag ctggtattcg gcgaacaagg tgtggatagg agagaaccta 401 tccctaatag atcagcttct gcaggtccag tgaatcccgg accatttgtt 451 cctggttcgg gataagcaat cagccatgtc cacgtccaag aggaagcggg 501 gagatgatgc gaactggaag aaggggacgg ctaagaagaa gacttctgca 551 gctggcctga agaagtctgt aagtaaggcc gataggccat ccctccaaat 601 tcagacactc ttgcatgcgg ggaccacaat gataactgtc ccctccggag 651 gtatttgcga cctcatcagc acctatgccc gaggttcaga tgagggcaac 701 cgacacacca gcgagactct tacgtacaag atgtccctcg actaccactt 751 cgttgctgac gcggcagcgt gcaagtactc caacattgga accggcgtgg 801 tctggctggt ttacgacact actcccggcg gacaagcccc gactaccaaa 851 cagatatttg cctacaacga cagcctagct gcctggccga cgacctggaa 901 ggtgagccgg gagatgtgtc accgcttcgt ggtgaaacgc cgttggctgt 951 tcaccatgga gaccaacggt cgcatcggtt cggacatgcc tccatcgaac 1001 gccatttgga acccctgcaa gcggagcatt aacttccaca agttcacgag 1051 tgggttggga gtaagaacga tgtggaagaa tgtcacagac ggtggcgttg 1101 gttcgataca gagaggagcc ttgtatatgt gcattgcccc tggcaatgga 1151 cttacattta ctgcccatgg gcagacccgt ctgtacttta agagtgttgg 1201 caaccagtaa tgaataaaaa ctcccgtttt attatattga tgaatgctga 1251 aagcttacat taatatgtcg tgcgatggca cgaaaacaca cgctatcaat 1301 acaggggggt agtcggaggg cggctaaggg tggtgctcgg cgggcaaaac 1351 atcaaaaaat caagatgttt atgaatgttc tgcctccgta ggaggcagct 1401 ccaggggaga ataccacttc tcccctggct gcatgatgta tatcatgcag 1451 tttgcctcga aatactccag ctgccctgga gtcatttcct tcatccaatc 1501 ttcatccgag ttggcgagaa tgattgtagg tttagacttc atctgaacct 1551 tcttcttctt cccatactta ggatttacaa tgaactcttt ttgacagcca 1601 actaactgtt tccaacaagg acagaattta aacgggatat catctactat 1651 gttgtagatt gcgtcttcgt tgtatgaaga ccaatcaaca ttattttgcc 1701 agtaattatg aacccctagg cttctggccc aagtagattt tccagttctt 1751 gttggaccga cgatgtagag gctctgcttt cttgatcttt catctgttgg 1801 ctggataagt tatccatcca ttgaaggtca gaaattgcat cctggacgga 1851 ataacaggta ggttgaagga gcatgtaagc ttcgcgacta acctgaaaga 1901 tgttaggctg gagccaatct ttgattgact cactacaaag caaatcaggt 1951 gatgagggtg gatgaggatc gatgaactct tcctgaatct ccggaaaaag 2001 tttctttgca gagtattcaa gatactgcaa ttttgtggcc cagtcataag 2051 gaaactcttt ctggatcatt gagaggtact cttgcttatt agtggagtgg 2101 gaaataatct ctctcattat ttcatctttg gtaggtttct ttgaacttcc 2151 ctctgaatca gattttccta ggaagggaga cttcctagga atgaaagtac 2201 ctctctcaaa taaagccaga ggttccttga gaatgtagtc tcgaaccttg 2251 ttaactgatt ttgcactctg aatgtttggg tggaaccctt tgatatcaaa 2301 gaaccttggg tcagttgttc ttaccggttt ctccgtctgg actaatgcat 2351 gtaaatgcag atttccatct ctatgtgcct ctcgggcaca tatgatgtac 2401 ttagggttcc agtgaccaac gagctcccag atcatctgac agacgatttc 2451 tggattttct ggacattgtg gatatgttag gaacgtgtta gcgttcctgt 2501 gtgagaactg acggttggat gaggaggagg ccatatccga cgacggagga 2551 tgatgctagg ggatggcaga ttgggagctc ccaaactcta tcctaccggt 2601 gcgccttcga aatccgccgc tgccctcttt atagtggttg tattctgggc 2651 cggaccgggc cggcccagca ggaaaagaag gcgcgcac