Sequence of DPV Citrus tristeza virus

Citrus tristeza virus isolate T3 clone 22 coat protein (CP) gene, complete cds.

ACC No: EU660907

Dated: 2012-02-09 | Length: 672 | CRC: -1406688059

                
ID   EU660907; SV 1; linear; genomic RNA; STD; VRL; 672 BP.
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AC   EU660907;
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DT   30-JAN-2009 (Rel. 99, Created)
DT   09-FEB-2012 (Rel. 111, Last updated, Version 3)
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DE   Citrus tristeza virus isolate T3 clone 22 coat protein (CP) gene, complete
DE   cds.
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KW   .
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OS   Citrus tristeza virus
OC   Viruses; ssRNA positive-strand viruses, no DNA stage; Closteroviridae;
OC   Closterovirus.
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RN   [1]
RP   1-672
RA   Cerni S., Skoric D., Ruscic J., Krajacic M., Papic T., Djelouah K.,
RA   Nolasco G.;
RT   "East Adriatic - a reservoir region of severe Citrus tristeza virus
RT   strains";
RL   Eur. J. Plant Pathol. 124(4):701-706(2009).
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RN   [2]
RP   1-672
RA   Papic T., Djelouah K., Santos C., Nolasco G.;
RT   ;
RL   Submitted (18-APR-2008) to the INSDC.
RL   Center for Biodiversity Functional and Integrative Genomics, Universidade
RL   do Algarve, Campus de Gambelas, Faro 8005-139, Portugal
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FH   Key             Location/Qualifiers
FH
FT   source          1. .672
FT                   /organism="Citrus tristeza virus"
FT                   /isolate="T3"
FT                   /mol_type="genomic RNA"
FT                   /country="Montenegro"
FT                   /isolation_source="Citrus unshiu"
FT                   /clone="22"
FT                   /db_xref="taxon:12162"
FT   gene            1. .672
FT                   /gene="CP"
FT   CDS             1. .672
FT                   /codon_start=1
FT                   /gene="CP"
FT                   /product="coat protein"
FT                   /db_xref="GOA:B9UIV7"
FT                   /db_xref="InterPro:IPR002679"
FT                   /db_xref="UniProtKB/TrEMBL:B9UIV7"
FT                   /protein_id="ACF76935.1"
FT                   /translation="MDDETKTLKNKNKETKEGDDVVAAESSFGSLNLHIDPTLIAMNDV
FT                   RQLGTQQNAALNRDLFLTLKGKHPNLPDKDKDFHIAMMLYRLAVKSSSLQSDDDTTGIT
FT                   YTREGVEVDLPDKLWTDVVFNSKGIGNRANALRVWGRTNDALYLAFCRQNRSLSYGGRP
FT                   LDAGIPAGYHYLCADFLTGAGLTDLECAVYIQAKEQLLKKRGADEVVVTNVRQLGKFNT
FT                   R"
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SQ   Sequence 672 BP; 196 A; 130 C; 169 G; 177 T; 0 other;

eu660907 Length: 672  09-FEB-2012  Type: N  Check: 9853  ..

       1  atggacgacg aaacaaagac attgaagaac aaaaacaagg aaacgaaaga
      51  aggcgacgat gttgttgcag ctgagtcttc tttcggttcg ttaaacttac
     101  acatcgatcc aactctgata gcgatgaatg acgtgcgtca gttgggtacc
     151  caacagaacg ctgctttaaa cagagattta tttcttactt tgaaagggaa
     201  gcatcctaac ttacctgaca aagataagga ctttcacata gctatgatgt
     251  tgtatcgttt agcagttaag agttcatcat tacaaagcga tgacgacact
     301  acgggtataa cgtacactcg ggagggtgtt gaagtggatt tgcctgacaa
     351  actttggact gacgtcgtgt ttaactccaa gggtattggc aaccgtgcta
     401  acgccctccg agtttggggt agaactaacg acgcccttta cttagctttt
     451  tgtagacaga atcgcagttt gagttatggc ggacgtccgc tagatgcagg
     501  gattccggcc gggtatcatt acctgtgtgc agatttcttg accggagctg
     551  gcttgactga tttagaatgt gctgtgtaca tacaagctaa agaacaattg
     601  ttaaagaagc gaggggctga tgaagtcgta gttaccaatg tcaggcagct
     651  tgggaaattc aacacacgtt ga