Sequence of DPV Citrus tristeza virus
Citrus tristeza virus isolate 438 clone 5 coat protein (CP) gene, complete cds.
ACC No: EU660909
Dated: 2012-02-09 | Length: 672 | CRC: -763821046
ID EU660909; SV 1; linear; genomic RNA; STD; VRL; 672 BP. XX AC EU660909; XX DT 30-JAN-2009 (Rel. 99, Created) DT 09-FEB-2012 (Rel. 111, Last updated, Version 2) XX DE Citrus tristeza virus isolate 438 clone 5 coat protein (CP) gene, complete DE cds. XX KW . XX OS Citrus tristeza virus OC Viruses; ssRNA positive-strand viruses, no DNA stage; Closteroviridae; OC Closterovirus. XX RN [1] RP 1-672 RA Cerni S., Skoric D., Ruscic J., Krajacic M., Papic T., Djelouah K., RA Nolasco G.; RT "East Adriatic - a reservoir region of severe Citrus tristeza virus RT strains"; RL Eur. J. Plant Pathol. 124(4):701-706(2009). XX RN [2] RP 1-672 RA Cerni S., Santos C., Martins V., Nolasco G.; RT ; RL Submitted (18-APR-2008) to the INSDC. RL Biology, University of Zagreb, Faculty of Science, Marulicev trg 9a, Zagreb RL HR-10000, Croatia XX FH Key Location/Qualifiers FH FT source 1. .672 FT /organism="Citrus tristeza virus" FT /isolate="438" FT /mol_type="genomic RNA" FT /country="Croatia" FT /isolation_source="Citrus unshiu" FT /clone="5" FT /db_xref="taxon:12162" FT gene 1. .672 FT /gene="CP" FT CDS 1. .672 FT /codon_start=1 FT /gene="CP" FT /product="coat protein" FT /db_xref="GOA:B9UIV9" FT /db_xref="InterPro:IPR002679" FT /db_xref="UniProtKB/TrEMBL:B9UIV9" FT /protein_id="ACF76937.1" FT /translation="MDDETKTLKNKNTETKEGDDVVAAESSYGSVNLHIDPTLITMNDV FT RQLSTQQNAALNRDLFLTLKGKYPNLPDKDKDFHIAMMLYRLAVKSSSLQSDDDTTGIT FT YTREGVEVDLSDKLWTDVVYNSKGIGNRTNALRVWGRTNDALYLAFCRQNRNLSYGGRP FT LDAGIPAGYHHLCADFLTGAGLTDLECAVYIQAKEQLLKKRGADEVVVTNVRQLGKFNT FT R" XX SQ Sequence 672 BP; 198 A; 129 C; 169 G; 176 T; 0 other; eu660909 Length: 672 09-FEB-2012 Type: N Check: 797 .. 1 atggacgacg aaacaaagac attgaagaac aaaaacaccg aaacaaaaga 51 aggcgacgat gttgttgcgg ctgagtcttc ttacggttcc gtaaacttac 101 acatcgatcc gactctgata acgatgaacg acgtgcgtca gttgagtact 151 caacagaatg ctgctttgaa cagagactta tttcttactc tgaaagggaa 201 gtatcctaac ttgcctgaca aagataagga ctttcacata gctatgatgt 251 tataccgttt agcggttaag agttcatcat tgcaaagtga tgatgacacc 301 acgggcataa cgtacactcg ggagggtgtt gaagtagatt tgtctgacaa 351 actttggacc gacgtcgtgt ataattctaa gggtattggc aaccgaacta 401 acgcccttcg agtctggggg agaactaacg atgctcttta cttagccttt 451 tgtagacaga accgcaattt gagttatggc ggacgtccgc tagatgcagg 501 gattccggct gggtatcatc atctgtgtgc agatttcttg accggagctg 551 gcttgactga tttagaatgt gctgtgtaca tacaagctaa agaacaattg 601 ttgaaaaagc gaggggctga tgaggttgta gttactaatg tcaggcagct 651 tgggaaattc aacacacgtt ga