Sequence of DPV Citrus tristeza virus
Citrus tristeza virus isolate 445 clone 5 coat protein (CP) gene, complete cds.
ACC No: EU660913
Dated: 2012-02-09 | Length: 672 | CRC: -1277745328
ID EU660913; SV 1; linear; genomic RNA; STD; VRL; 672 BP. XX AC EU660913; XX DT 30-JAN-2009 (Rel. 99, Created) DT 09-FEB-2012 (Rel. 111, Last updated, Version 2) XX DE Citrus tristeza virus isolate 445 clone 5 coat protein (CP) gene, complete DE cds. XX KW . XX OS Citrus tristeza virus OC Viruses; ssRNA positive-strand viruses, no DNA stage; Closteroviridae; OC Closterovirus. XX RN [1] RP 1-672 RA Cerni S., Skoric D., Ruscic J., Krajacic M., Papic T., Djelouah K., RA Nolasco G.; RT "East Adriatic - a reservoir region of severe Citrus tristeza virus RT strains"; RL Eur. J. Plant Pathol. 124(4):701-706(2009). XX RN [2] RP 1-672 RA Cerni S., Santos C., Martins V., Nolasco G.; RT ; RL Submitted (18-APR-2008) to the INSDC. RL Biology, University of Zagreb, Faculty of Science, Marulicev trg 9a, Zagreb RL HR-10000, Croatia XX FH Key Location/Qualifiers FH FT source 1. .672 FT /organism="Citrus tristeza virus" FT /isolate="445" FT /mol_type="genomic RNA" FT /country="Croatia" FT /isolation_source="Citrus unshiu" FT /clone="5" FT /db_xref="taxon:12162" FT gene 1. .672 FT /gene="CP" FT CDS 1. .672 FT /codon_start=1 FT /gene="CP" FT /product="coat protein" FT /db_xref="GOA:B9UIW3" FT /db_xref="InterPro:IPR002679" FT /db_xref="UniProtKB/TrEMBL:B9UIW3" FT /protein_id="ACF76941.1" FT /translation="MDDETKTLKNKNKETKEGDDVVAAESSFGSLNLHIDPTLIAMNDV FT RQLGTQQNAALNRDLFLTLKGKYPNLPDKDKDFHIAMMLYRLAVKSSSLQSDDDTTGVT FT YTREGVEVELSDKLWTDVVFNSKGIGNRTNAPRVWGRTNDALYLAFCRQNRNLSYGGRP FT LDAGIPAGYHYLCADFLTGAGLTDLECAVYLQAKEQLLKKRGADEVVVTNVRQLGKFNT FT R" XX SQ Sequence 672 BP; 197 A; 126 C; 170 G; 179 T; 0 other; eu660913 Length: 672 09-FEB-2012 Type: N Check: 3189 .. 1 atggacgacg aaacaaagac attgaagaac aaaaacaagg aaacgaaaga 51 aggcgacgat gttgttgcag ctgagtcttc tttcggttcg ttaaacttac 101 acatcgatcc gactctgata gcgatgaacg atgtgcgtca gttgggtacc 151 caacagaatg ctgctttgaa tagagatttg tttcttacct tgaaagggaa 201 gtatcccaac ttacctgaca aagataaaga ctttcacata gctatgatgt 251 tatatcgttt agcagttaag agttcatcat tacaaagcga cgatgacacc 301 acgggtgtga cgtacactcg ggaaggtgtt gaagtggagt tgtctgacaa 351 actttggaca gacgtcgtgt ttaactctaa gggtattggt aaccgtacta 401 acgcccctcg agtctggggt agaactaacg atgcccttta tttggctttt 451 tgtagacaga accgcaactt gagttatggt ggacgtccgt tagatgcagg 501 aattccagcc gggtatcact acctgtgtgc agatttcttg accggagctg 551 gcttgactga tttagaatgt gcagtgtact tacaagctaa agagcaatta 601 ttaaagaagc gaggggctga tgaggtcgta gttactaatg tcaggcagct 651 tgggaaattc aacacacgtt ga