Sequence of DPV Citrus tristeza virus
Citrus tristeza virus isolate 446 clone 6 coat protein (CP) gene, complete cds.
ACC No: EU660915
Dated: 2012-02-09 | Length: 672 | CRC: -1821156
ID EU660915; SV 1; linear; genomic RNA; STD; VRL; 672 BP. XX AC EU660915; XX DT 30-JAN-2009 (Rel. 99, Created) DT 09-FEB-2012 (Rel. 111, Last updated, Version 2) XX DE Citrus tristeza virus isolate 446 clone 6 coat protein (CP) gene, complete DE cds. XX KW . XX OS Citrus tristeza virus OC Viruses; ssRNA positive-strand viruses, no DNA stage; Closteroviridae; OC Closterovirus. XX RN [1] RP 1-672 RA Cerni S., Skoric D., Ruscic J., Krajacic M., Papic T., Djelouah K., RA Nolasco G.; RT "East Adriatic - a reservoir region of severe Citrus tristeza virus RT strains"; RL Eur. J. Plant Pathol. 124(4):701-706(2009). XX RN [2] RP 1-672 RA Cerni S., Santos C., Martins V., Nolasco G.; RT ; RL Submitted (18-APR-2008) to the INSDC. RL Biology, University of Zagreb, Faculty of Science, Marulicev trg 9a, Zagreb RL HR-10000, Croatia XX FH Key Location/Qualifiers FH FT source 1. .672 FT /organism="Citrus tristeza virus" FT /isolate="446" FT /mol_type="genomic RNA" FT /country="Croatia" FT /isolation_source="Citrus unshiu" FT /clone="6" FT /db_xref="taxon:12162" FT gene 1. .672 FT /gene="CP" FT CDS 1. .672 FT /codon_start=1 FT /gene="CP" FT /product="coat protein" FT /db_xref="GOA:B9UIW5" FT /db_xref="InterPro:IPR002679" FT /db_xref="UniProtKB/TrEMBL:B9UIW5" FT /protein_id="ACF76943.1" FT /translation="MDDETKTLKNEIKETKEGDDVVAAESSFGSLNLHIDPTLIAMNDV FT RQLGTQQNAALNRDLFLTLKGKYPNLSDKDKDFHIAMMLYRLAVKSSSLQSDADTTGIT FT YTREGVEVDLSDKLWTGVVFNSKGIGNRTNALRVWGRSNDALYLAFCRQNRNLSYGGRP FT LDAGIPAGYHYLCADFLTGAGLTDLECAVYIQAKEQLLKKRGADEVVVTNVRQLGKFNT FT R" XX SQ Sequence 672 BP; 189 A; 128 C; 176 G; 179 T; 0 other; eu660915 Length: 672 09-FEB-2012 Type: N Check: 2942 .. 1 atggacgacg aaacaaagac attgaagaac gaaatcaagg aaacgaaaga 51 aggcgacgat gttgttgcag cggagtcttc tttcggttcc ttaaacttac 101 acatcgatcc gactctgata gcgatgaacg atgtgcgtca gttaggtact 151 caacagaacg ccgctttgaa cagagactta ttccttactt tgaaagggaa 201 gtatcctaat ttgtctgata aagataagga ctttcacata gctatgatgt 251 tgtatcgttt agcggttaag agttcatcat tgcaaagtga cgccgacacc 301 acgggcataa cgtacactcg ggagggcgtc gaagtggatt tgtctgacaa 351 actttggact ggcgtcgtgt ttaattctaa gggtatcggt aaccgtacta 401 acgcccttcg agtctggggt agaagtaacg atgcccttta tttagcgttt 451 tgtagacaga atcgcaattt gagttatggc ggacgtccgc tagatgcagg 501 gattccagcc gggtatcatt acctgtgtgc agatttcttg accggagctg 551 gcttgactga cttggaatgt gctgtgtaca tacaagctaa agaacaattg 601 ttgaagaagc gaggggctga tgaagtcgta gttactaatg tcaggcagct 651 tgggaaattc aacacacgtt ga