Sequence of DPV Citrus tristeza virus
Citrus tristeza virus isolate Q8 clone 5 coat protein (CP) gene, complete cds.
ACC No: EU660917
Dated: 2012-02-09 | Length: 672 | CRC: -2126139670
ID EU660917; SV 1; linear; genomic RNA; STD; VRL; 672 BP. XX AC EU660917; XX DT 30-JAN-2009 (Rel. 99, Created) DT 09-FEB-2012 (Rel. 111, Last updated, Version 2) XX DE Citrus tristeza virus isolate Q8 clone 5 coat protein (CP) gene, complete DE cds. XX KW . XX OS Citrus tristeza virus OC Viruses; ssRNA positive-strand viruses, no DNA stage; Closteroviridae; OC Closterovirus. XX RN [1] RP 1-672 RA Cerni S., Skoric D., Ruscic J., Krajacic M., Papic T., Djelouah K., RA Nolasco G.; RT "East Adriatic - a reservoir region of severe Citrus tristeza virus RT strains"; RL Eur. J. Plant Pathol. 124(4):701-706(2009). XX RN [2] RP 1-672 RA Cerni S., Santos C., Martins V., Nolasco G.; RT ; RL Submitted (18-APR-2008) to the INSDC. RL Biology, University of Zagreb, Faculty of Science, Marulicev trg 9a, Zagreb RL HR-10000, Croatia XX FH Key Location/Qualifiers FH FT source 1. .672 FT /organism="Citrus tristeza virus" FT /isolate="Q8" FT /mol_type="genomic RNA" FT /country="Albania" FT /isolation_source="Citrus limon" FT /clone="5" FT /db_xref="taxon:12162" FT gene 1. .672 FT /gene="CP" FT CDS 1. .672 FT /codon_start=1 FT /gene="CP" FT /product="coat protein" FT /db_xref="GOA:B9UIW6" FT /db_xref="InterPro:IPR002679" FT /db_xref="UniProtKB/TrEMBL:B9UIW6" FT /protein_id="ACF76945.1" FT /translation="MDDETKTLKNKNKETKEGDDVVAAESSFSSVNLHIDPTLITMNDV FT RQLSTQQNAALNRDLFLTLKGKHPNLPDKDKDFHIAMMLYRLAVKSSSLQSDDDATGIT FT YTREGVEVELSDKLWTDVVFNSKGIGNRTNALRVWGRTNDALYLAFCRQNRNLSYGGRP FT LDAGIPAGYHYLCADFLTGAGLTDLECAVYIQAKEQLLKKRGADEVVVTNVRQLGKFNT FT R" XX SQ Sequence 672 BP; 198 A; 129 C; 167 G; 178 T; 0 other; eu660917 Length: 672 09-FEB-2012 Type: N Check: 8254 .. 1 atggacgacg aaacaaagac attgaagaac aaaaacaagg aaacaaaaga 51 aggcgacgat gttgttgctg ccgagtcttc tttcagttcc gtaaacttac 101 acatcgatcc gactttgata acgatgaacg atgtgcgtca gttgagtacc 151 caacagaacg ctgctttgaa cagagactta ttccttactt tgaaagggaa 201 gcatcctaac ttacctgata aagataagga ctttcacata gctatgatgt 251 tgtatcgctt agcagttaag agttcatcac tacaaagcga tgacgacgcc 301 acgggtataa cgtacactcg ggagggtgtt gaagtggaat tgtctgacaa 351 actttggact gacgtcgtgt ttaactctaa gggtatcggt aaccgtacta 401 acgcccttcg agtttggggt agaactaacg atgcccttta cttagctttt 451 tgcagacaga atcgcaattt gagttatggc ggacgtccgc tagacgcagg 501 gattccggcc gggtatcatt acttgtgtgc ggatttcttg actggagctg 551 gtttgactga tttagaatgt gctgtgtaca tacaagctaa agaacaatta 601 ttgaagaagc gaggggctga tgaagtcgta gttactaatg tcaggcagct 651 tgggaaattc aacacacgtt ga