Sequence of DPV Citrus tristeza virus
Citrus tristeza virus isolate 16J clone 9-2 coat protein (CP) gene, complete cds.
ACC No: EU660919
Dated: 2012-02-09 | Length: 672 | CRC: -1078675497
ID EU660919; SV 1; linear; genomic RNA; STD; VRL; 672 BP. XX AC EU660919; XX DT 30-JAN-2009 (Rel. 99, Created) DT 09-FEB-2012 (Rel. 111, Last updated, Version 2) XX DE Citrus tristeza virus isolate 16J clone 9-2 coat protein (CP) gene, DE complete cds. XX KW . XX OS Citrus tristeza virus OC Viruses; ssRNA positive-strand viruses, no DNA stage; Closteroviridae; OC Closterovirus. XX RN [1] RP 1-672 RA Cerni S., Skoric D., Ruscic J., Krajacic M., Papic T., Djelouah K., RA Nolasco G.; RT "East Adriatic - a reservoir region of severe Citrus tristeza virus RT strains"; RL Eur. J. Plant Pathol. 124(4):701-706(2009). XX RN [2] RP 1-672 RA Cerni S., Ruscic J., Skoric D.; RT ; RL Submitted (18-APR-2008) to the INSDC. RL Biology, University of Zagreb, Faculty of Science, Marulicev trg 9a, Zagreb RL HR-10000, Croatia XX FH Key Location/Qualifiers FH FT source 1. .672 FT /organism="Citrus tristeza virus" FT /isolate="16J" FT /mol_type="genomic RNA" FT /country="Croatia" FT /isolation_source="Citrus limon" FT /clone="9-2" FT /db_xref="taxon:12162" FT gene 1. .672 FT /gene="CP" FT CDS 1. .672 FT /codon_start=1 FT /gene="CP" FT /product="coat protein" FT /db_xref="GOA:B9UIW9" FT /db_xref="InterPro:IPR002679" FT /db_xref="UniProtKB/TrEMBL:B9UIW9" FT /protein_id="ACF76947.1" FT /translation="MDDETKTLKNKNKETKEGDNAVAAESSFGSINLHIDPTLIAMNDV FT RQLGTQQNTALNRDLLLTLEGKHPDLPDKDKDFHIAMMLYRLAVKSSSLQSDDDTTGIT FT YTREGVEVDLPDKLWTDVVFNSKGIGNRANALRVWGRTNDALYLAFCRQNRNLSYGGRP FT LDAGIPAGYHYLCADFLTGAGLTDLECAVYIQAKEQLLKKRGADEVVVTNVRQLGKFNT FT R" XX SQ Sequence 672 BP; 195 A; 132 C; 169 G; 176 T; 0 other; eu660919 Length: 672 09-FEB-2012 Type: N Check: 13 .. 1 atggacgacg aaacaaagac attgaagaac aaaaacaagg aaacgaaaga 51 aggcgacaac gctgttgctg ccgagtcttc tttcggttcc ataaacttac 101 acatcgatcc aactttgata gcgatgaatg atgtgcgtca gttgggtacc 151 cagcagaaca ctgctttaaa cagagactta cttcttactt tggaagggaa 201 gcatcctgac ttacctgata aagataagga ctttcatata gctatgatgt 251 tgtatcgttt agcagttaag agttcatcat tacaaagcga tgacgacact 301 acgggtataa cgtacactcg ggagggtgtc gaagtggatt tgcctgacaa 351 actttggacc gacgtcgtgt ttaactccaa gggtattggc aaccgtgcta 401 acgcccttcg agtttggggt agaactaacg atgcccttta cttagctttt 451 tgtagacaga atcgcaattt gagttatggc ggacgtccgc tagatgcagg 501 gattccggcc gggtatcatt acctgtgtgc agatttcttg accggagctg 551 gcttgactga tttagaatgt gctgtgtaca tacaagctaa agaacaattg 601 ttgaagaagc gaggggctga tgaagtcgta gttaccaatg tcaggcagct 651 tgggaaattc aacacacgtt ga