Sequence of DPV Citrus tristeza virus
Citrus tristeza virus isolate 45J clone E coat protein (CP) gene, complete cds.
ACC No: EU660926
Dated: 2012-02-09 | Length: 672 | CRC: 666832560
ID EU660926; SV 1; linear; genomic RNA; STD; VRL; 672 BP. XX AC EU660926; XX DT 30-JAN-2009 (Rel. 99, Created) DT 09-FEB-2012 (Rel. 111, Last updated, Version 2) XX DE Citrus tristeza virus isolate 45J clone E coat protein (CP) gene, complete DE cds. XX KW . XX OS Citrus tristeza virus OC Viruses; ssRNA positive-strand viruses, no DNA stage; Closteroviridae; OC Closterovirus. XX RN [1] RP 1-672 RA Cerni S., Skoric D., Ruscic J., Krajacic M., Papic T., Djelouah K., RA Nolasco G.; RT "East Adriatic - a reservoir region of severe Citrus tristeza virus RT strains"; RL Eur. J. Plant Pathol. 124(4):701-706(2009). XX RN [2] RP 1-672 RA Cerni S., Ruscic J., Skoric D.; RT ; RL Submitted (18-APR-2008) to the INSDC. RL Biology, University of Zagreb, Faculty of Science, Marulicev trg 9a, Zagreb RL HR-10000, Croatia XX FH Key Location/Qualifiers FH FT source 1. .672 FT /organism="Citrus tristeza virus" FT /isolate="45J" FT /mol_type="genomic RNA" FT /country="Croatia" FT /isolation_source="Citrus unshiu" FT /clone="E" FT /db_xref="taxon:12162" FT gene 1. .672 FT /gene="CP" FT CDS 1. .672 FT /codon_start=1 FT /gene="CP" FT /product="coat protein" FT /db_xref="GOA:B9UIX6" FT /db_xref="InterPro:IPR002679" FT /db_xref="UniProtKB/TrEMBL:B9UIX6" FT /protein_id="ACF76954.1" FT /translation="MDDETKTLKNKNKETKEGDDVVAAESSFSSINLHIDPTLIAMNDV FT RQLGTQQNAALNRDLFLTLKGKHPNLPDKDKDFHIAMMLYRLAVKSSSLQSDDDTTGIT FT YTREGVEVDLPDKLWTDVVFNSKGIGNRTNALRVWGRTNDALYLAFCRQNRNLSYGGRP FT LDAGIPTGYHYLCADFLTGAGLTDLECAVYVQAKEQLLKKRGADEVVVTNVRQLGKFNT FT R" XX SQ Sequence 672 BP; 199 A; 129 C; 166 G; 178 T; 0 other; eu660926 Length: 672 09-FEB-2012 Type: N Check: 9594 .. 1 atggacgacg aaacaaagac attgaagaac aaaaataagg aaacgaaaga 51 aggcgatgac gttgttgccg ctgagtcttc tttcagttcc ataaacttac 101 acatcgatcc aactctgata gcgatgaatg acgtgcgtca gttgggtacc 151 caacagaacg ctgctttaaa cagagactta tttcttactt tgaaagggaa 201 gcatcctaac ttacctgaca aagataagga ctttcacata gctatgatgt 251 tgtatcgttt agcagttaaa agttcatcat tacaaagtga tgacgacact 301 acgggtataa cgtacactcg ggagggtgtt gaagtggatt tgcctgacaa 351 actttggact gacgtcgtgt ttaactccaa gggtattggc aaccgtacta 401 acgcccttcg agtttggggt agaactaacg atgcccttta tttagcgttt 451 tgtagacaga atcgcaattt gagttatggc ggacgtccgc tagatgcagg 501 gattccaacc gggtatcatt acctgtgcgc agatttcttg accggagctg 551 gcttgactga cttggaatgt gctgtgtacg tacaagctaa agaacaattg 601 ttgaagaagc gaggggctga tgaagtcgta gttactaatg tcaggcagct 651 tgggaaattc aacacacgtt ga