Sequence of DPV Citrus tristeza virus
Citrus tristeza virus isolate 6J clone 5-2 coat protein (CP) gene, complete cds.
ACC No: EU660927
Dated: 2012-02-09 | Length: 672 | CRC: -1895786814
ID EU660927; SV 1; linear; genomic RNA; STD; VRL; 672 BP. XX AC EU660927; XX DT 30-JAN-2009 (Rel. 99, Created) DT 09-FEB-2012 (Rel. 111, Last updated, Version 2) XX DE Citrus tristeza virus isolate 6J clone 5-2 coat protein (CP) gene, complete DE cds. XX KW . XX OS Citrus tristeza virus OC Viruses; ssRNA positive-strand viruses, no DNA stage; Closteroviridae; OC Closterovirus. XX RN [1] RP 1-672 RA Cerni S., Skoric D., Ruscic J., Krajacic M., Papic T., Djelouah K., RA Nolasco G.; RT "East Adriatic - a reservoir region of severe Citrus tristeza virus RT strains"; RL Eur. J. Plant Pathol. 124(4):701-706(2009). XX RN [2] RP 1-672 RA Cerni S., Ruscic J., Skoric D.; RT ; RL Submitted (18-APR-2008) to the INSDC. RL Biology, University of Zagreb, Faculty of Science, Marulicev trg 9a, Zagreb RL HR-10000, Croatia XX FH Key Location/Qualifiers FH FT source 1. .672 FT /organism="Citrus tristeza virus" FT /isolate="6J" FT /mol_type="genomic RNA" FT /country="Croatia" FT /isolation_source="Citrus unshiu" FT /clone="5-2" FT /db_xref="taxon:12162" FT gene 1. .672 FT /gene="CP" FT CDS 1. .672 FT /codon_start=1 FT /gene="CP" FT /product="coat protein" FT /db_xref="GOA:B9UIX7" FT /db_xref="InterPro:IPR002679" FT /db_xref="UniProtKB/TrEMBL:B9UIX7" FT /protein_id="ACF76955.1" FT /translation="MDDETKTLKNKNKETKEGDDVVAAESSFGSVNLHIDPTLITMNDV FT RQLSTQQNAALNRDLFLALKGKYPNLPDKDKDFHTAMMLYRLAVKSSSLQSDDDTTGIT FT YTREGVEVDLSDKLWTDIVYNSKGIGNRTNALRVWGRTNDALYLAFCRQNRNLSYGGRP FT LDAGIPAGYHYLCADFLTGAGLTDLECAVYIQAKEQLLKRRGADEVVVTNVRQLGKFNT FT R" XX SQ Sequence 672 BP; 196 A; 126 C; 172 G; 178 T; 0 other; eu660927 Length: 672 09-FEB-2012 Type: N Check: 2532 .. 1 atggacgacg aaacaaagac attgaagaac aaaaacaagg aaacgaaaga 51 gggcgacgat gttgttgcag ctgagtcttc tttcggttcc gtaaacttac 101 acatcgatcc gactctgata acgatgaacg atgtgcgtca gttgagtact 151 caacagaatg ctgctttgaa cagggactta tttcttgctc tgaaagggaa 201 gtaccctaac ttgcctgaca aagataagga ctttcacaca gcaatgatgt 251 tataccgttt agcggttaag agttcatcat tgcaaagtga tgatgacacc 301 acgggcataa cgtacactcg ggagggtgtt gaagtagatt tgtctgacaa 351 actttggacc gacatcgtgt ataattctaa gggtattggt aaccgaacta 401 acgcccttcg agtctggggt agaactaacg atgctcttta cttagccttt 451 tgtagacaga accgcaactt gagttatggc ggacgtccgc tagatgcagg 501 gattccggct gggtatcatt atttgtgtgc agatttcttg accggagctg 551 gcttgactga tttagaatgt gctgtgtaca tacaagctaa agaacaattg 601 ttgaaaaggc gaggggctga tgaggttgta gttactaatg tcaggcagct 651 tgggaaattc aacacacgtt ga