Sequence of DPV Citrus tristeza virus
Citrus tristeza virus isolate 16J clone 6-2 coat protein (CP) gene, complete cds.
ACC No: EU660928
Dated: 2012-02-09 | Length: 672 | CRC: -1841474228
ID EU660928; SV 1; linear; genomic RNA; STD; VRL; 672 BP. XX AC EU660928; XX DT 30-JAN-2009 (Rel. 99, Created) DT 09-FEB-2012 (Rel. 111, Last updated, Version 2) XX DE Citrus tristeza virus isolate 16J clone 6-2 coat protein (CP) gene, DE complete cds. XX KW . XX OS Citrus tristeza virus OC Viruses; ssRNA positive-strand viruses, no DNA stage; Closteroviridae; OC Closterovirus. XX RN [1] RP 1-672 RA Cerni S., Skoric D., Ruscic J., Krajacic M., Papic T., Djelouah K., RA Nolasco G.; RT "East Adriatic - a reservoir region of severe Citrus tristeza virus RT strains"; RL Eur. J. Plant Pathol. 124(4):701-706(2009). XX RN [2] RP 1-672 RA Cerni S., Ruscic J., Skoric D.; RT ; RL Submitted (18-APR-2008) to the INSDC. RL Biology, University of Zagreb, Faculty of Science, Marulicev trg 9a, Zagreb RL HR-10000, Croatia XX FH Key Location/Qualifiers FH FT source 1. .672 FT /organism="Citrus tristeza virus" FT /isolate="16J" FT /mol_type="genomic RNA" FT /country="Croatia" FT /isolation_source="Citrus limon" FT /clone="6-2" FT /db_xref="taxon:12162" FT gene 1. .672 FT /gene="CP" FT CDS 1. .672 FT /codon_start=1 FT /gene="CP" FT /product="coat protein" FT /db_xref="GOA:B9UIX8" FT /db_xref="InterPro:IPR002679" FT /db_xref="UniProtKB/TrEMBL:B9UIX8" FT /protein_id="ACF76956.1" FT /translation="MDDETKTLKNKNRETKEGDDVVAAESSFGSLNFHIDPTLIAMNDV FT RQLSTQQNAALNRDLFLTLKGKYPNLSDKDKDFHLAMMLYRLAVKSSSLQSDDDTTGIT FT YTREGVEVDLSDKLWTDVVFNSKGIGNRTNALRVWGRSNDALYLAFCRQNRNLSYGGRP FT LDAGIPAGYHYLCADFLTGAGLTDLECAVYIQAKEQLLKKRGADEIVVTNVRRLGKFNT FT R" XX SQ Sequence 672 BP; 190 A; 133 C; 175 G; 174 T; 0 other; eu660928 Length: 672 09-FEB-2012 Type: N Check: 9976 .. 1 atggacgacg aaacaaagac attgaagaac aaaaacaggg aaacgaaaga 51 aggcgacgat gttgttgcag cggagtcttc tttcggctcc ttaaacttcc 101 acatcgatcc gactctgata gcgatgaacg acgtgcgtca gttaagtacc 151 caacagaacg ccgctttgaa cagagatttg ttccttactt tgaaagggaa 201 gtatcctaat ttgtctgata aagacaaaga ctttcactta gctatgatgt 251 tgtatcgttt agcggttaag agttcatcat tgcaaagcga cgacgacacc 301 acgggcataa cgtacactcg ggagggcgtc gaagtggatt tgtctgacaa 351 actttggact gacgtcgtgt ttaattctaa gggtatcggt aaccgtacta 401 acgcccttcg agtctggggt agaagtaacg atgcccttta tttagcgttt 451 tgtagacaga atcgcaattt gagttatggc ggacgtccgc tagatgcagg 501 gattccggcc gggtatcatt acctgtgcgc agatttcttg accggagctg 551 gcttgactga tttagaatgt gctgtgtaca tacaggctaa agaacaattg 601 ttgaagaagc gaggggctga tgaaatcgta gttaccaatg tcaggcggct 651 tgggaaattc aacacacgtt ga