Sequence of DPV Tomato yellow leaf curl virus

Tomato yellow leaf curl virus isolate Ch12 precoat protein (V2) gene, complete cds; and coat protein (V1) gene, partial cds.

ACC No: EU677429

Dated: 2009-03-23 | Length: 510 | CRC: 1999455436

                
ID   EU677429; SV 1; linear; genomic DNA; STD; VRL; 510 BP.
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AC   EU677429;
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DT   02-AUG-2008 (Rel. 96, Created)
DT   23-MAR-2009 (Rel. 100, Last updated, Version 2)
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DE   Tomato yellow leaf curl virus isolate Ch12 precoat protein (V2) gene,
DE   complete cds; and coat protein (V1) gene, partial cds.
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KW   .
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OS   Tomato yellow leaf curl virus
OC   Viruses; ssDNA viruses; Geminiviridae; Begomovirus.
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RN   [1]
RP   1-510
RX   PUBMED; 19112612.
RA   Fazeli R., Heydarnejad J., Massumi H., Shaabanian M., Varsani A.;
RT   "Genetic diversity and distribution of tomato-infecting begomoviruses in
RT   Iran";
RL   Virus Genes 38(2):311-319(2009).
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RN   [2]
RP   1-510
RA   Heydarnejad J., Fazeli R., Massumi H.;
RT   ;
RL   Submitted (23-APR-2008) to the EMBL/GenBank/DDBJ databases.
RL   Plant Protection Department, Shahid Bahonar University of Kerman, 22 Bahman
RL   Ave, Kerman, Kerman 7616914111, Iran
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FH   Key             Location/Qualifiers
FH
FT   source          1. .510
FT                   /organism="Tomato yellow leaf curl virus"
FT                   /host="Chrozophora hierosolymitana"
FT                   /isolate="Ch12"
FT                   /mol_type="genomic DNA"
FT                   /country="Iran:Kerman, Jiroft"
FT                   /db_xref="taxon:10832"
FT   gene            127. .474
FT                   /gene="V2"
FT   CDS             127. .474
FT                   /codon_start=1
FT                   /gene="V2"
FT                   /product="precoat protein"
FT                   /db_xref="GOA:B4YT05"
FT                   /db_xref="InterPro:IPR005159"
FT                   /db_xref="UniProtKB/TrEMBL:B4YT05"
FT                   /protein_id="ACF04184.1"
FT                   /translation="MWDPLLHEFPESVHGLRCMLAVKYLKEIEKTYSPDTIGYDLVRDL
FT                   ISVVRARNYGEASSRYLHFNARIESTPSSELRQPVCCPCSCPYCPRHKGKGMGEQTHEP
FT                   ETKILPDVSKL"
FT   gene            287. .>510
FT                   /gene="V1"
FT   CDS             287. .>510
FT                   /codon_start=1
FT                   /gene="V1"
FT                   /product="coat protein"
FT                   /note="CP"
FT                   /db_xref="GOA:B4YT06"
FT                   /db_xref="InterPro:IPR000263"
FT                   /db_xref="UniProtKB/TrEMBL:B4YT06"
FT                   /protein_id="ACF04185.1"
FT                   /translation="MVKRPADIYISTPASKARRRLNFDSPYAVRAAVPIVRATKAREWV
FT                   NRPMNRKPRFYRMYRSSDVPRGCEGPCKV"
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SQ   Sequence 510 BP; 141 A; 123 C; 125 G; 121 T; 0 other;

eu677429 Length: 510  23-MAR-2009  Type: N  Check: 9436  ..

       1  taatattacc ggatggccgc ggtgcctttt gtgtgggtcc agaaccaatg
      51  aaattcgaga tacatggcta atttaatgca tggggaccaa taaatagact
     101  tgcgcaccaa gattggatcc acaaacatgt gggatccatt attgcacgaa
     151  tttcctgaaa gcgttcatgg tcttaggtgc atgctagctg taaaatatct
     201  caaagagatt gaaaagacct attctccgga cacaatcgga tacgatcttg
     251  ttcgtgacct aatctctgtc gtccgtgcga gaaactatgg tgaagcgtcc
     301  agcagatatc tacatttcaa cgcccgcatc gaaagcacgc cgtcgtctga
     351  acttcgacag cccgtatgct gtccgtgcag ctgtccctat tgtccgcgcc
     401  acaaaggcaa gggaatgggt gaacagaccc atgaaccgga aaccaagatt
     451  ttaccggatg tatcgaagct ctgacgtgcc caggggctgt gaagggccat
     501  gcaaagtcca