Sequence of DPV Carnation Italian ringspot virus
Carnation Italian ringspot virus coat protein gene, complete cds.
ACC No: EU684163
Dated: 2008-06-04 | Length: 1161 | CRC: 894917259
ID EU684163; SV 1; linear; genomic RNA; STD; VRL; 1161 BP. XX AC EU684163; XX DT 04-JUN-2008 (Rel. 96, Created) DT 04-JUN-2008 (Rel. 96, Last updated, Version 1) XX DE Carnation Italian ringspot virus coat protein gene, complete cds. XX KW . XX OS Carnation Italian ringspot virus OC Viruses; ssRNA positive-strand viruses, no DNA stage; Tombusviridae; OC Tombusvirus. XX RN [1] RP 1-1161 RA Russo M., De Stradis A., Vovlas C.; RT "A disease of Limonium sinuatum caused by Carnation Italian ringspot RT virus"; RL Unpublished. XX RN [2] RP 1-1161 RA Russo M., Rubino L.; RT ; RL Submitted (30-APR-2008) to the EMBL/GenBank/DDBJ databases. RL Istituto di Virologia Vegetale, CNR, Via Amendola 165/A, Bari, BA 70126, RL Italy XX FH Key Location/Qualifiers FH FT source 1. .1161 FT /organism="Carnation Italian ringspot virus" FT /specific_host="Limonium sinuatum" FT /mol_type="genomic RNA" FT /country="Italy" FT /collection_date="15-Mar-2008" FT /virion FT /note="acronym: CIRV" FT /db_xref="taxon:39443" FT CDS 1. .1161 FT /codon_start=1 FT /product="coat protein" FT /note="capsid protein" FT /protein_id="ACD85085.1" FT /translation="MTMDPRNSGTMVPQGGSKMSKMAKNAFQQGLQAGAAYLMSNPKGA FT LKKGKDAWNYMTAGGVPSGIVHSGGMKGAIMAPVAVTRQLRGSKPKFSGRTSGSVTVSH FT RELITQVNNSTQFVVNGGVTGNLRQVNPLNGTLFSWLPSIAANFDQYTFNSVTLHYVPL FT CATTETGRVAMYFDKDSEDPEPADRVELANYATLKETAPWAEAMLRIPTDRIKRHNDDS FT SVNDRKLIDLGQIGIATYGGSGTNPVGDVFISNSVTLHFPQPTAVGVQTRRLDLTSVLD FT TNVGPSYTITSSTATVYTVAFRTVGTFMLLGAVRSTGSPVIGLSSANIAINSNTTLNTV FT GTAFSYMTNVTVSALPASITFTVVGVITSSTSHAVRASRTNNADLI" XX SQ Sequence 1161 BP; 323 A; 260 C; 294 G; 284 T; 0 other; eu684163 Length: 1161 04-JUN-2008 Type: N Check: 3828 .. 1 atgacaatgg atccaagaaa ttcaggcaca atggtgcctc aaggcggcag 51 caaaatgagc aagatggcga agaacgcatt tcaacaagga ttacaagcag 101 gggctgctta tctgatgagc aaccctaagg gggcattgaa gaaggggaaa 151 gacgcatgga attacatgac agcagggggt gtgccaagtg gtatagtaca 201 ctcagggggc atgaaaggcg cgataatggc gcccgtggca gttaccagac 251 agttaagggg gagtaaacct aaattctccg gaagaacatc tggttccgtg 301 acagtgagtc atagagagct aattacgcaa gtgaacaact caacgcagtt 351 tgtggttaat ggtggtgtta ctggtaacct taggcaagtt aatcccttga 401 atgggacctt gttctcatgg ctgcctagca ttgccgctaa ctttgaccag 451 tacacattca atagtgttac gttacattac gtacctttat gtgctactac 501 cgagactggg cgagttgcaa tgtattttga caaagattcc gaggaccctg 551 agcccgcgga cagagtagag cttgctaact atgctacatt gaaagaaact 601 gcaccatggg ccgaggctat gttacgtata cctactgatc gtatcaaacg 651 gcataatgat gacagcagcg taaatgatcg caaattgatt gacctgggac 701 agataggtat tgcaacatat ggtggttcgg gcacaaaccc tgtcggggac 751 gtgttcatat ctaacagtgt tactctacac ttcccacaac ccactgcagt 801 cggcgtacag acacggcgtc ttgatctcac aagtgttttg gacacaaatg 851 tcggacctag ttatactatc acgtccagta cggcgacagt gtacacagtt 901 gcttttcgca ctgtgggcac ttttatgctg ttaggagctg tgaggtcaac 951 tgggtcaccc gttatcggac tatccagtgc aaatattgct attaatagca 1001 acaccacgtt gaacacagtc ggtactgctt tctcctacat gacgaacgtg 1051 acggtgtcgg ctttgccggc atccatcacg ttcactgtag ttggagtgat 1101 tacttcatca acttcacatg ccgtgagagc atcccgcact aataacgcag 1151 acctgatata g