Sequence of DPV Pepino mosaic virus
Pepino mosaic virus isolate VC-dk3 coat protein (CP) gene, complete cds.
ACC No: EU915705
Dated: 2008-08-25 | Length: 714 | CRC: 1742873175
ID EU915705; SV 1; linear; genomic RNA; STD; VRL; 714 BP. XX AC EU915705; XX DT 25-AUG-2008 (Rel. 96, Created) DT 25-AUG-2008 (Rel. 96, Last updated, Version 1) XX DE Pepino mosaic virus isolate VC-dk3 coat protein (CP) gene, complete cds. XX KW . XX OS Pepino mosaic virus OC Viruses; ssRNA positive-strand viruses, no DNA stage; Flexiviridae; OC Potexvirus. XX RN [1] RP 1-714 RA Janssen D.; RT "Molecular characterization of Pepino mosaic virus from Almeria, Spain"; RL Unpublished. XX RN [2] RP 1-714 RA Janssen D.; RT ; RL Submitted (22-JUL-2008) to the EMBL/GenBank/DDBJ databases. RL Virology, IFAPA (CAP, Junta de Andalucia), Autovia del Mediterraneo km 420, RL La Mojonera, Almeria 04745, Spain XX FH Key Location/Qualifiers FH FT source 1. .714 FT /organism="Pepino mosaic virus" FT /specific_host="tomato" FT /isolate="VC-dk3" FT /mol_type="genomic RNA" FT /country="Spain" FT /collection_date="Apr-2007" FT /db_xref="taxon:112229" FT gene 1. .714 FT /gene="CP" FT CDS 1. .714 FT /codon_start=1 FT /gene="CP" FT /product="coat protein" FT /protein_id="ACH43127.1" FT /translation="MENQPTASNPSDVPPTAAQAGAQSPADFSNPNTAPSLSDLKKIKY FT VSTVTSVATPAEIEALGKIFTAMGLATNETGPAMWDLARAYADVQSSKSAQLIGATPSN FT PALSRRALAAQFDRINITPRQFCMYFAKIVWNILLDSNVPPANWAKLGYQEDTKFAAFD FT FFDGVTNPASLQPADGLIRQPNEKELAAHSVAKYGALARQKISTGNYITTLGEVTRGHM FT GGANTMYAIDAPPEL" XX SQ Sequence 714 BP; 196 A; 194 C; 144 G; 180 T; 0 other; eu915705 Length: 714 25-AUG-2008 Type: N Check: 443 .. 1 atggaaaacc aacctacagc ttctaaccca tcagatgtac caccaactgc 51 tgctcaagct ggtgcccaga gcccagccga cttctcaaat cctaatacag 101 ctccttccct aagtgatttg aagaagatca aatacgtgtc aactgtcact 151 tcagttgcca cgcctgctga aatcgaggcc cttggcaaga tctttactgc 201 catgggttta gcaaccaatg agaccggacc tgccatgtgg gacctcgctc 251 gtgcttatgc tgatgtgcaa agttcaaaat ctgcacaact tataggtgcc 301 acaccatcca accctgcttt gtctagacgt gcacttgctg cacagtttga 351 tcgtatcaat atcacaccca gacaattctg catgtatttt gcaaaaattg 401 tttggaacat actgttagac agcaatgtgc cacctgccaa ctgggcaaaa 451 ttgggctatc aggaagatac caagtttgct gcttttgact tctttgatgg 501 agtcacaaat ccagctagtc tacagcctgc agatggccta atcaggcagc 551 ccaatgaaaa agagcttgct gctcactcag ttgctaaata tggtgccctt 601 gcccgccaga aaatatccac tggtaactac atcaccaccc ttggtgaagt 651 tacacgtggt cacatgggcg gcgccaacac tatgtacgca attgatgcac 701 ctcctgaact ttaa